Glycine max (soybean): 100806019
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Entry
100806019 CDS
T01710
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100806019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100806019
Spliceosome [BR:
gmx03041
]
Complex A
U1 snRNP components
U1 related factors
100806019
Complex B
100806019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
100806019
NCBI-ProteinID:
XP_014628635
UniProt:
K7M5R6
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All DBs
Position
14:complement(8194722..8210832)
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AA seq
1002 aa
AA seq
DB search
MANNSQPSSMQFRPVTQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPM
QQLTQRPMQPGHPAPSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHMPGLAVSVAAPH
SSYFTLSYGQQQDNANALAQYQHPPQMFAPPSGQPWPSSASQSAVAVTSVQPAGVQSSGA
TSTDAVINATNQQSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWK
EFTSSEGRKYYYNKVTQQSTWSIPEELKLAREQAQNAANQGMQSETSDTCNAVVSSTETP
TPTAANAASLNTSLTSNGLASSPSSVTPIAATDSQRLVSGLSGTSVSHSMATPSTTGVEP
STVVTTSAAPTIVAGSSGLAENSPQQPKMPPVVENQASQDFASANGSSLQDIEEAKRPLP
VVGKNNVTPPEEKTNDDETLVYANKLEAKNAFKALLESVSVQSDWTWEQAMREIINDKRY
NALKTLGERKQAFNEYLGQRKKLEAEERRMKQKRAREEFTKMLEECKELTSSMRWSKAIS
MFENDERFNAVERPRDREDLFESYMVELERKEKENAAEEHRQNIAEYRKFLESCDYVKVN
SPWRKIQDRLEDDDRYLRLEKIDRLLVFQDYIRDLEKEEEEQKRIQKDRIRRGERKNRDA
FRKLLGEHVSAGILTAKTQWREYCLKVRDLPQYQAVASNTSGSTPKDLFEDVAEDLEKQY
HEDKTLIKDTVKSGKITVVTTSVFEEFKVAVLEGAACQTISEINLKLIFEELLERAKEKE
EKEAKKRQRLADDFTNLLYTFKDITTSSKWEDCKSLFEETQEYRSIGDESYSREIFEEYI
TYLKEKAKEKDRKREEEKAKKEKEREEKRKEKEKKEKDREREKDKSKERNKKDETDSDNQ
DMADSHGYKEEKKKEKDKERKHRKRHQSSIDDVDSEKEEKEESKKSRRHGSERKKSRKHA
NSPESDNENRHRRHKRDHWDGSRKTGGHEELEDGELGDDAEN
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggccaataattctcaaccctccagcatgcagtttcggccagtcactcaagctcagcaa
gggcaaccatttgttccaatgaattcacaacaatttgggcctgcaggacatgctattcct
tcttcaaatgcggggatgcctgtcattcaaggtcagcaattgcagtattctcaaccaatg
cagcagttgactcagagaccaatgcagcctggtcatcctgctccttcatcacaagctata
cctatgcaatatattcagacaaaccggccactgacatccattccaccacattcacagcaa
aatgttccccctttaagcaatcatatgcctggcttggctgtttcagtagcagctcctcat
tcttcatatttcacactatcttatggtcagcagcaagataatgcaaatgcattggctcaa
taccagcatccacctcaaatgtttgctcctccttctggtcaaccttggccatcctctgca
tctcagagtgctgtggctgttacatctgtgcagccggctggggtgcaatcatctggtgct
acatcgactgatgcggtaatcaatgctactaaccagcaatccttatctgattggcaagag
cacacttctgctgatgggagaagatattattacaacaagaggacaaggcaatctagttgg
gagaaacctttagaattgatgtctcctatagagagagctgatgcatcaactgtttggaag
gaattcacttcttccgaaggaagaaagtattattataacaaggttactcagcaatcaaca
tggtcaataccagaggaacttaagttggctcgtgagcaggcacagaatgctgcaaaccag
ggaatgcagtcagaaacaagtgatacatgcaatgctgtagtctcctccacagaaacacca
acaccaacagcagctaatgcagctagcttgaacacttccttgacatcaaatgggcttgct
tccagcccgtcttctgtcacaccaattgcagcaactgattctcaacggttggtttctgga
ttatctgggacctctgtttcccattctatggctaccccaagcaccacaggggtagaacca
agcactgtggtaactacgagtgctgcacctacaatagttgccggaagctctggactagct
gagaattcacctcaacaacccaaaatgccacccgttgttgaaaatcaagcatctcaagat
tttgcttctgcaaatggatcttctcttcaagatatcgaggaagccaaaagaccattgcct
gtggttggaaaaaataatgtgactccacctgaagagaaaaccaatgacgatgaaaccttg
gtatatgcaaataaactggaagcaaaaaatgcatttaaagcgcttttggaatctgtgagt
gttcagtctgattggacatgggaacaggcaatgagagaaattatcaatgacaaaagatat
aatgcactaaaaactcttggtgagcgaaaacaggcttttaatgagtatttgggccaaagg
aagaagctggaggctgaagagaggcgcatgaagcagaaaagagcccgtgaagaattcaca
aagatgttggaggagtgcaaggaacttacatcatccatgaggtggagcaaagctattagt
atgtttgaaaatgatgaacgattcaatgctgttgaaagaccaagggaccgagaagattta
tttgaaagctacatggtggaacttgagaggaaggaaaaggaaaatgctgcagaggaacac
cgccagaatatagcagaatatagaaaatttctggagtcctgtgactatgtgaaggtgaat
agcccttggcgaaaaatccaagatcggttagaggatgatgatagatacttgcgacttgaa
aaaattgaccgcttgctagttttccaggactatattcgggacttggagaaagaagaagag
gaacaaaaaagaatacagaaggatcgaattcgtcggggtgaaaggaaaaaccgtgatgca
tttcgcaagttgcttggagaacatgtttctgctggaattcttactgctaaaactcaatgg
cgagaatattgcttgaaggttagggatttacctcaatatcaagctgttgcgtcaaatacc
tctggttccactccaaaagatttgtttgaggatgttgctgaggatcttgaaaaacagtat
catgaagacaagacgctcataaaagatacagttaagtcaggcaagatcactgtagtgact
acatcagtatttgaggagtttaaggtcgctgtcttggaaggagctgcatgccaaacaata
tctgagatcaatttgaagcttatattcgaagagttgttagagagagctaaggagaaggag
gagaaagaagccaagaagcgccaacgccttgctgatgactttactaacctgttatataca
ttcaaggatattacaacttcctcaaaatgggaggattgcaagtcactttttgaggagact
caagagtacaggtcaattggagacgaaagctatagtagagaaatttttgaggaatacatc
acatacttgaaggaaaaagctaaagagaaggatcgcaagcgtgaagaggaaaaggctaaa
aaggagaaagaaagagaagagaaacggaaggagaaggaaaaaaaagaaaaggatagagaa
cgtgaaaaagataagtctaaggaacgtaataagaaggatgaaacagatagtgataatcaa
gacatggctgacagccatggttacaaagaggagaagaaaaaagaaaaggataaagaaagg
aaacatcggaaaaggcatcagagcagtatagatgatgtggattctgaaaaggaagagaag
gaagaatctaaaaaatcacgaaggcatggcagtgaacgcaagaagtctcggaagcatgca
aactctcctgaatcagacaatgaaaaccggcatagaagacacaagagggaccactgggat
ggttccaggaaaactggggggcatgaggaacttgaagacggggagctcggggatgatgct
gagaactag
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