Glycine max (soybean): 100806423
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Entry
100806423 CDS
T01710
Name
(RefSeq) THO complex subunit 6
KO
K03257
translation initiation factor 4A
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100806423
03012 Translation factors [BR:
gmx03012
]
100806423
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100806423
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100806423
mRNA cycle factors
Stress granule specific factors
100806423
Translation factors [BR:
gmx03012
]
Eukaryotic type
Initiation factors
eIF-4
100806423
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100806423
Exosomal proteins of bladder cancer cells
100806423
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
PQQ_3
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_Nup120_160
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
100806423
NCBI-ProteinID:
XP_025982284
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All DBs
Position
17:4042860..4049215
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AA seq
374 aa
AA seq
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MCGDATNWDEDAYRETILKEREIQTRTVFRTAWAPPYTSNLDTLILASSDGSVASYSISS
SIAASKIKNPFGFVNADTDELLAEPNCFVQAHDGPAYDVRFYGDGEDALLLSCGDDGRIR
GWRWNEFSSSNYSVSSQGNDIKPVLDVVNPQHKGPWGALSPIPENNAIAVNTQGGSVFAA
SGDSCAYCWDVETGKVKMVFKGHMDYLHCIVARNSLDQIITGSEDGTTRIWDCKSGKCTQ
VIDPARDLKLKGSASWVGCVALDASESWLACSSGRNISLWNLPASECISKIPTRACVQDM
LFDNNQILTVGTDPLLNRFDMNGTILSQIQCAPSSSFSISLHPAGVMAVGGYGCLVDVIS
QFGSHMCTFHCQCF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggtgacgccacgaactgggacgaagacgcatacagagaaaccattctcaaggag
agggaaatccaaacccgaaccgttttccgaaccgcttgggccccaccctacacctctaac
ctcgacactctcatccttgcctctagcgacggttccgtcgcatcctactccatctcttcc
tccatcgccgcctctaagataaaaaatccattcggtttcgtcaatgccgatacagatgag
ttgttggctgaaccaaattgcttcgttcaagcgcacgatggacctgcttacgatgtcaga
ttttatggtgatggcgaagatgctctgttgctgagctgtggtgatgatggtcggattcga
ggatggagatggaacgaattttcaagctcaaattattctgtttcttcccaaggaaatgat
atcaagcctgtacttgatgtggtgaatccccaacacaaaggtccttggggtgcgctttca
cctatccctgagaataatgctattgctgtcaatactcaggggggatctgtttttgctgca
tctggcgattcttgtgcatattgttgggatgtggaaactggtaaagtgaaaatggtattc
aaggggcacatggactatttgcattgtatagttgctcgcaactcattagatcagatcata
acaggttcggaggatgggacgacacgaatttgggattgcaaaagtggaaagtgtacgcaa
gtgattgatccagcaagagatttgaaattaaagggatctgcttcttgggttggctgtgtt
gctttagatgcaagtgagagctggttggcttgcagtagtggacgtaatatatcactttgg
aaccttcctgcttctgaatgcatatcaaagattcctacccgtgcttgtgtacaagacatg
ttatttgacaataatcaaattttgacagttggtacagatcctctactcaatcgctttgac
atgaacggcactatcctttcacaaatacagtgtgctccttcgtcatctttttctatctcc
ttacatcctgcaggggttatggcagttggaggttatggatgtcttgttgatgttatctca
caatttggcagccacatgtgcacatttcattgccagtgtttctaa
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