Glycine max (soybean): 100806799
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Entry
100806799 CDS
T01710
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100806799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100806799
03041 Spliceosome [BR:
gmx03041
]
100806799
03036 Chromosome and associated proteins [BR:
gmx03036
]
100806799
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100806799
Spliceosome [BR:
gmx03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100806799
Complex B
100806799
Complex C
U2 SnRNP specific factors
100806799
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100806799
TFTC complex
100806799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
100806799
NCBI-ProteinID:
XP_006577112
UniProt:
I1JQE1
LinkDB
All DBs
Position
3:42580587..42595175
Genome browser
AA seq
1387 aa
AA seq
DB search
MAVSEEECSSANSGSGPSSSSSSASARYYLSKCVLRGSVVLQVLHAHIRSPSSNDVIFGK
ETSIELVVIDEDGNVQSVCDQPVFGTVKDLAILPWNEKFRVARDPQLWGKDLLVATSDSG
KLSLLTFCNEMHRFIPVTHIQLSNPGNQIYLPGRKLAVDSSGCFIASSAYEDRLALFSLS
MSSGDIIDERIVYPSENEGTASTSRSIQRIGIRGTIWSICFISQDSRQPSKEHNPVLAVI
INRRGALLNELLLLEWNVKAHKIFVISQYVEAGPLAHDIVEVPNSGGLAFLFRAGDVLLM
DLRDHRNPSCVCKTNLNFLPNAMEEQTYVEESCKLHDVDDERFSVAACALLELSDYDPMC
IDSDNGGANSGYKYICSWSWEPENNRDPRMIFCVDTGEFFMIEVLFDSEGPKVNLSECLY
KGLPCKALLWVESGYLAALVEMGDGMVLKLEDGRLCYINPIQNIAPILDMEVVDYHDEKQ
DQMFACCGVAPEGSLRIIRNGINVENLHRTASIYQGVTGTWTVRMRVTDSHHSFLVLSFV
EETRILSVGLSFTDVTDSVGFQPNVCTLACGLVTDGLLVQIHKSTVKLCLPTKAAHSEGI
PLSSPICTSWSPDNVSISLGAVGHNFIVVSTSNPCFLFILGVRLLSAYQYEIYEMQHLVL
QNELSCISIPGQEIEQKQSNSSISANNSSISSFQIQSGVDINKTFVIGTHRPSVEIWYFA
PGGGITVVACGTISLTNTVGTAISGCVPQDVRLVFVGKYYVLAGLRNGMLLRFEWPAEPC
PSSPINIVDTALSSINLVNSVTNAFDKRNDFPSMLQLIAIRRIGITPVFLVPLGDTLDAD
IITLSDRPWLLHSARHSLSYSSISFQPSTHVTPVCSVECPKGILFVAENSLHLVEMVHSK
RLNMQKFHLEGTPRKVLYHDESKMLLVMRTELNCGTCLSDICIMDPLSGSVLSSFRLELG
ETGKSMELVRVGSEQVLVVGTSLSSGPHTMATGEAESCKGRLLVLCLDHVQNSDSGSVTF
CSKAGSSSQKTSPFREIVTYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLTFATKW
PGVVLKICPYLDRYFLATAGNAFYVCGFPNDNPQRVRRYAMGRARFMITSLTAHFTRIAV
GDCRDGILLYSYHEEAKKLELLYNDPSLRLVADCILMDADTAVVSDRKGSIAVLCSDHLE
DNAGAQCNMALSCAYFMAEIAMSIKKGSYSYRLPADDVLQGGNGPKTNVDSLQNTIIATT
LLGSIMIFIPLSREEYELLEAVQARLVVHHLTAPVLGNDHNEFRSRENRVGVPKILDGDM
LTQFLELTSMQQKMILSLELPDMVKPSLKPLLPSHVSVNQNAEHAYAVLNNIVRQRLRVC
FSKCCQI
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctgaagaagaatgctcttctgcgaattcaggttcaggtccctcttcttcg
tcttcctccgcctcggcgcgctactacctctccaagtgcgttctcagaggcagcgtcgtt
cttcaggttctccacgctcacatccgttctccctcctcaaacgacgtcattttcggcaag
gagacatctattgaattggtggttattgacgaggatgggaatgtgcaatctgtgtgtgat
cagcctgtctttggcaccgtcaaagatcttgccatattgccctggaatgagaaatttcgt
gtcgcacgtgatccgcagctgtggggtaaagaccttttggttgctacatctgattctggg
aagttgtcgttgctcacattttgcaatgaaatgcacaggtttattcctgtaacacatatt
cagctatctaatcctggaaaccaaatttatcttcctggaagaaagttagcagttgattcc
agtggttgttttattgcttccagtgcatacgaagatcggctggctttgttttctttgtca
atgtctagtggtgatatcattgatgagagaattgtatatccttctgaaaatgaagggact
gcaagtacttccagaagcatccagagaatcggtatacgtggtactatttggagcatctgt
ttcatttcacaagattccagacaaccaagcaaggagcataatcctgtactagctgttatt
ataaataggaggggagcgcttctaaatgaactgctattattggaatggaatgttaaagca
cataaaatatttgttatttctcagtatgttgaagctgggcctctagcacatgacattgtt
gaagttcccaactccgggggacttgcatttctatttagggctggtgatgttctcttaatg
gatcttagagatcatcgcaacccatcctgtgtctgtaagactaacttgaactttttaccc
aatgccatggaagagcagacttatgtggaagagtcttgtaaattacatgatgttgatgat
gaacgctttagtgttgctgcctgtgctttgttggagctgagcgattatgatcctatgtgc
atagacagtgacaatggtggtgccaattcaggttacaaatacatatgctcgtggagttgg
gaacctgaaaataatagagatcctaggatgatcttctgtgtagatactggagaatttttt
atgattgaagttctttttgattctgaaggccctaaagttaatctgtctgagtgtctctat
aaaggtctaccctgtaaagcacttttgtgggttgaaagtggatatctagctgcccttgtg
gaaatgggggatggtatggtcctgaaattggaagatggaaggctgtgctatataaaccct
attcaaaacattgcaccaatcttggatatggaagttgtagattatcatgatgagaagcaa
gatcaaatgtttgcttgctgtggtgtggcaccagaggggtcattaaggattattcgaaat
ggtattaatgtggaaaatctacataggactgcttctatatatcaaggggtaactggtact
tggacggtccgaatgagagttacggattcacaccattcttttctggttctatcatttgtt
gaggaaaccagaatattgtcagttggcttaagttttactgatgtgactgattcagttggt
ttccaacctaatgtctgtactttggcatgcggccttgtgactgatggtttgcttgtccag
atccacaaatctactgttaagctttgtttgcccactaaggctgctcattctgaaggtatc
cctttgtcctctcctatttgcacatcttggtctccagacaatgtgagtattagtttgggg
gcagttgggcataatttcatagttgtgtcaacctctaacccatgctttctgtttatcctt
ggggttagattgctatcagcttatcaatatgaaatttatgaaatgcaacatttggtactg
cagaatgagttatcatgcatttccatccctggacaagaaattgagcaaaaacaatcaaat
tcatccatttcagctaataatagtagcatctcttcttttcaaattcaaagtggagtggac
atcaataaaacctttgttattggcacacataggccttctgtggaaatttggtattttgca
ccaggtggaggaattacagtagttgcttgtgggacaatttcattaacgaatacagtaggg
actgccataagtggttgtgtaccccaagatgtgcggcttgtatttgttggtaagtattat
gttcttgctggattgaggaatggaatgctccttcgctttgagtggccggcggaaccatgt
ccttcatcaccaataaacatagtggatactgctttatcttctataaatttggtaaattct
gtgactaatgcttttgacaagagaaatgactttccttccatgcttcaattgattgccatt
agacgaattggcattactccagttttcttggtgcccctgggtgatacactggatgccgat
ataattactcttagtgataggccttggttgttgcatagtgcaagacacagcctgtcctat
tcttctatctcatttcaaccatccacgcatgtaactcctgtttgctctgttgagtgtcca
aaaggaatactatttgttgcagaaaacagtttacatctggtggagatggtccacagcaag
agacttaatatgcagaagtttcatttagagggcactccacggaaggtcttgtatcatgat
gaaagcaagatgttgcttgtgatgaggactgaactgaattgtggtacatgtttgtctgac
atatgtattatggatcccctaagtgggtcagtactgtcgtcttttagacttgaacttgga
gaaacaggaaaatccatggaattagtaagagttggaagtgagcaggtgcttgttgttgga
actagtctgtcttcgggtccacacacaatggccactggtgaagctgaaagttgcaagggt
cgtcttcttgttctttgtcttgatcatgtgcaaaattcagatagtggttcagtgacgttc
tgttcaaaggcagggtcatcatctcaaaaaacttcaccattccgtgaaattgttacatat
gctcctgaacagttatcgagcagtagccttggcagcagtccagatgataatagttctgat
ggcatcaaactcgatgaaaatgaagtatggcagttccgattaacttttgcaactaaatgg
ccgggagttgtacttaaaatctgtccttatcttgatcgttacttcttggcaactgctggc
aatgctttctatgtttgtggtttccctaatgacaatcctcaaagagtgagaaggtatgct
atgggaagggcgcgcttcatgataacatctttgactgcacattttactagaattgcagtt
ggtgattgccgtgatggtatccttctatattcttatcatgaggaagcaaaaaaattggag
ctactttacaatgacccatcacttaggttagttgctgattgcattctcatggatgctgat
acagctgttgtttcggatcgtaaaggaagcattgctgttttatgttcagatcacttggaa
gacaatgcaggtgcacaatgcaacatggcactaagctgtgcttatttcatggctgagata
gccatgagcatcaagaagggctcatattcatacagacttccagctgatgatgttttgcaa
ggtggaaatggccccaagacaaatgttgattcattacaaaatactattattgccactacc
ctgttaggaagcataatgatcttcatccctttatcaagggaagaatatgagctcttagaa
gcagtgcaagcaagacttgttgtccatcatttgacagcacctgttctaggaaatgatcat
aatgagtttcgcagtcgcgaaaatcgggttggagtacccaagatacttgatggtgacatg
ttgacccagtttctggagctgacaagtatgcagcaaaagatgattttgtctttggagcta
ccggatatggtaaaaccaagtttgaagccactcctaccctcccatgtttctgtaaatcag
aacgcggaacatgcatatgcagttctaaacaatattgtccgtcaacggttgcgtgtctgc
ttctcaaagtgttgtcagatatag
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integrated database retrieval system
