Glycine max (soybean): 100806846
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Entry
100806846 CDS
T01710
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Module
gmx_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100806846
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100806846
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
100806846
NCBI-ProteinID:
XP_014627864
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Position
20:2456261..2460089
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AA seq
399 aa
AA seq
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MTNPTPKPSPSLLITLRVILGCWLCSSVAFGATYNVVNFGAKSDGKTDSTKAFLNAWSKA
CASTNPASIYVPQGKFLLKSVTFNGKCNNKGISITIDGTLVAPSDYSVTGSAGTWLEFER
VDGVSIRGGVLDGQGTALWDCKNSGRGNCPSGATTLAFTNSNNIAIGGLTSMNSQMFHIV
FNGCQNVKLQGVKVLADGNSPNTDGIHVQMSSHITILNSKIRTGDDCISVGPGTTNLWIE
NIACGPGHGISIGSLGKDLKEAGVQNVTVKTVTFTGTQNGVRIKTWGRPSNGFVRNVLFQ
DAIMVNVENPVIIDQNYCPNNKGCPDQASGVKVSDVTYQDIHGTSATHVAVKFDCSSKYP
CNGIKLEDVKLTYKNQPALASCNHAGGAALGSVQPESCF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacccaacaccaaaacctagtcctagtcttcttattacccttcgtgtgatctta
ggttgttggttgtgttcatccgttgcatttggagccacctacaatgtggtcaattttgga
gccaaatccgatggcaaaacggactcaaccaaggcatttctcaatgcatggtccaaagct
tgtgcttctaccaaccctgcctcaatttacgtgccacaaggaaaattcttgcttaaaagt
gtgactttcaatgggaaatgtaacaacaagggtatttctataaccattgatggcactttg
gtggctccttcggattatagtgtcaccggaagcgccggtacgtggttggaattcgagcgt
gtcgacggcgtttcgattcgcggcggggtgcttgacggccaaggcactgccttgtgggat
tgcaagaactccggcagaggaaactgccccagcggagccacgacactggcgttcaccaac
tccaataacattgccatcggtgggttgacctcaatgaacagtcaaatgttccacatagtg
ttcaatggatgccagaacgtgaagctgcaaggagtgaaggtcctggccgacggaaacagc
cccaacactgacggcatccatgtacaaatgtcgtcccacatcaccatcctcaactcaaaa
atccggaccggcgatgattgcatctccgtcggtcccggaaccactaacttgtggattgaa
aacattgcttgtggaccaggacatggaataagcattggaagcttgggaaaggatttgaag
gaagccggtgtacaaaatgtgacagttaaaactgttacatttactgggactcaaaatggt
gttagaataaagacatgggggagacccagtaacggatttgtgaggaacgtccttttccaa
gacgcaatcatggtcaatgttgaaaaccccgttataattgaccaaaattactgcccaaat
aacaagggctgccccgatcaggcttctggagtcaaagtgagtgatgtgacataccaagac
attcatggaacatctgccacccatgttgctgtgaaatttgattgcagttccaagtaccca
tgtaatgggataaagttagaggatgtgaagctcacttacaagaaccaaccagccctagct
tcgtgcaaccatgctggtggagcagcattgggttcggttcaaccagagagttgcttttag
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