Glycine max (soybean): 100807011
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Entry
100807011 CDS
T01710
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmx03009
]
100807011
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100807011
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Helicases
100807011
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
NACHT
Motif
Other DBs
NCBI-GeneID:
100807011
NCBI-ProteinID:
XP_003538481
UniProt:
A0A0R0HL42
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Position
11:complement(37710237..37715821)
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AA seq
665 aa
AA seq
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MDSEFPNKALTSVRFSDLNPPLSEPVLQALSHSGFDFCTPVQAATIPLLCSFKDVAVDAA
TGSGKTLAFVIPLVEILRRSSSHPKPHKVLGIIISPTRELSTQIYHVAQSFISTLMNVKS
MLLVGGAEVKTDIKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDM
GFQKQITSIISLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSEKGPASSK
QPESSKTPSGLHIEYLECEEDKKPSQLLDILIKNRSKKIIIYFMTCACVDYWGAVLPCLS
VLKGFSLIPLHGKMKQSAREKALASFTTLSNGILLCTDVAARGLDIPGVDCIVQYDPPQD
PNVFIHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERICSDDATDVVPQIRS
AAKKDRDVMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLATGFGLLQLPSMPEVKHH
SLSTDGFEPVEDINLVDIKYRDKSREKQRKKNLQAKKEAKEREPKPQKPKKTPIAPTATR
KKTARQRRAQQTMEDEEELMQEYRLLKKLKKGTIDENEYAKLTGAQGDEIIFPQALLVAE
NEPPSGLAHSNGWNPLPIFLSIISNSWQPLSYTVTEIASLTSSPSLKNPKRMSSNPCTGK
HRFHL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggattccgagttccccaacaaagcgttaacaagcgtgcgtttttccgacctgaatccg
ccactctctgaaccggttctccaagccctatcacactccggcttcgacttctgcaccccc
gtccaagccgccaccattcccttgctctgcagtttcaaggacgtcgccgtcgacgccgcc
accggttccggcaaaaccctagcttttgtcattcctctcgtcgagattctacgtcgctcc
tcttctcatcccaagcctcacaaggtgctaggaataattatatcccctacaagggagcta
tcaactcaaatatatcatgttgcacagtccttcatttcaacattgatgaatgttaagtcc
atgctcctcgttggtggagcagaagtaaaaacagacataaagaaaatagaggaggaagga
gcaaacatattgattggcacgcccggacggctatatgacataatgaatcggatggatgtt
ttggatcttaaaaaccttgagattttgattttggatgaggctgatagactcttagatatg
ggattccagaagcagataacttctattatatctctcttgcctaagcttcggagaactggt
ctgttctctgctactcaaactgaggctattgaagagcttgctaaggcaggattgaggaac
cctgtgagggttgaagttcgagcagaaacaaaatcagaaaagggtcccgcatcatcaaaa
caaccagaatcttccaaaacaccttcaggacttcacattgagtacttggaatgcgaggaa
gataagaagccatcacagctactagatatccttattaagaatcgctcaaaaaaaattata
atatatttcatgacttgtgcatgcgttgattattggggagctgtccttccttgtctttct
gttttgaaaggcttctccttgattcccctacatgggaagatgaagcagtctgccagggag
aaagcactagcttcatttacaaccctttcaaatggaattcttctatgtacagatgttgct
gcacgtggacttgacataccgggtgtagattgtatagtgcagtatgatcctcctcaagat
ccaaacgttttcatacatagagtaggtcgaactgctcggctgggtaaacaaggtcatgct
gttgtcttcttattaccaaaggaggaatcttatgtagaattcctgcgtataagaagagtt
ccccttcaagagagaatatgttctgatgatgctaccgatgttgttcctcagattcgttct
gccgcaaaaaaagatcgtgatgtcatggaaaagggaattaaggcttttgtttcttacatc
cgtgcttataaagagcatcactgttcctatatttttaggtggaaagaacttgaaattggt
aaattggctacgggatttggcttattacaacttccttcaatgccggaggtaaagcaccac
tcactttccacggatggatttgagccagttgaagatatcaatttggtggacattaagtac
agggataaatcacgggagaaacaaaggaagaagaacctgcaagcaaagaaagaagccaaa
gagagagagccaaaacctcaaaaaccgaagaaaaccccaattgcacccactgccacgcgg
aagaaaacagcccgacagagacgtgctcagcagacaatggaagacgaggaagagttgatg
caggaataccgcttattgaagaaattgaagaaagggaccatagatgagaacgaatatgcc
aagttgacaggtgcgcaaggcgatgagatcattttccctcaagcactgttggtcgcagaa
aatgaaccaccctcaggtttggcacatagtaatggttggaatcctttacccattttcttg
agcatcatatcaaactcatggcaacctttgtcatacacggtcactgaaattgcctctcta
acatcttcaccttctttaaagaaccctaagaggatgtcttcgaacccttgcacgggcaag
cataggttccacttgtaa
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