Glycine max (soybean): 100807324
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Entry
100807324 CDS
T01710
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100807324
04121 Ubiquitin system [BR:
gmx04121
]
100807324
Enzymes [BR:
gmx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100807324
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
100807324
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100807324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-HC5HC2H_2
Rad50_zn_hook
DUF7129
Motif
Other DBs
NCBI-GeneID:
100807324
NCBI-ProteinID:
XP_025982507
LinkDB
All DBs
Position
18:2885122..2887241
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AA seq
377 aa
AA seq
DB search
MMMSSGTSSYWCYRCSRFVRVWPHHTIVCPDCDGGFIEEIEHPPRSVHLDPRRRQRFPAA
AMYMIGQRPSSDHPSRPAALRRTRRNGGDRSPFNPVIVLRGGAATAEDESRGFELFYDDG
AGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEINGIGRYEHPPASKAAIDSLPTIEIDDT
HLAMESHCAVCKEAFELGTAVREMPCKHIYHPECILPWLALHNSCPVCRHELPADTPNPN
QNQNPSQNVALNEEENVGLTIWRLPGGGFAVGRFSGGRRGAERELPVVYTEMDGGFNNGG
GEPRRISWSRGNRGRESGGLTRFFRNLFGCFRGSSTQRSASSRESMRASSSRSSTMDPSL
RSRRTWSMDVNSGMRAW
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgtcttccgggacatcctcgtactggtgctaccgctgcagccgcttcgttcgc
gtctggccccaccacaccatcgtctgtcccgactgcgacggcggcttcatcgaagaaatc
gaacacccgccccgctccgtccacctcgacccccgccgccgccaacgcttccccgccgcc
gccatgtacatgatcggccagcgcccttcctcggaccacccctcccgccccgctgccctc
cgccgcacccgccgcaacggcggcgaccgctcccccttcaaccccgtcatcgtcctccgc
ggcggcgcagccaccgcggaggatgaaagtcgcggctttgaactcttctacgacgacggc
gccggctccggcctccgacccttaccacctagcatgtcagagtttctcctcggatctggc
ttcgacagactcttggaacaactctctcagattgagatcaacggtattggacggtacgag
caccctcctgcttcaaaagcagccattgattcattaccaaccatcgaaattgatgacacc
catttagccatggagtcacactgcgcggtttgtaaggaagctttcgaattaggaactgca
gttagagaaatgccatgcaagcacatatatcatcctgaatgcatattaccgtggctcgca
cttcacaactcttgccccgtttgtcgccacgagttacccgctgataccccgaatccaaat
caaaatcaaaatccgtctcaaaatgttgccttgaacgaggaggagaatgtggggttgacg
atttggaggttgcctggtggagggtttgcggtgggtagattctccggtgggagaagaggt
gctgagagagagcttcctgtggtttacactgaaatggatggtgggtttaacaatgggggg
ggtgagccgaggaggatttcttggtccagagggaatagagggagggagagtggagggttg
actaggtttttccgcaatctgtttggttgcttcagaggaagtagtactcagcgttctgct
tctagtagagagtctatgagggcgagttcctctcgttctagtactatggatccttcgttg
cggtctcggaggacttggtctatggatgtaaacagtgggatgagagcgtggtag
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