Glycine max (soybean): 100807578
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Entry
100807578 CDS
T01710
Name
(RefSeq) nuclear pore complex protein NUP160
KO
K14303
nuclear pore complex protein Nup160
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100807578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100807578
03036 Chromosome and associated proteins [BR:
gmx03036
]
100807578
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100807578
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100807578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP160_helical_2
Beta-prop_Nup120_160
TPR_NUP160_120_M
HEAT_Nup120
TPR_Nup160_C
NUP160_helical
TVHS-like
Motif
Other DBs
NCBI-GeneID:
100807578
NCBI-ProteinID:
XP_006594152
UniProt:
K7LZQ2
LinkDB
All DBs
Position
13:24573494..24592034
Genome browser
AA seq
1501 aa
AA seq
DB search
MGTGSTLASKEVPIVGSDAVRWIDLSVPSSSNIAAVDDGGAAPLTTDDRASCFVIGDPPT
YLIWRIHKAQPHSLELLELAASKEFPRVGLRFTFPDALCPFAFICKNEISGASRVPYLLY
VLTVSGVAYLLKIRNVSVYASVSVFPVDELLEVNVRGYIPNHAATITAVTATVGGLVVGT
SDGSVFCFQLGVLDSSAPGFMHELRDDAGISRLWGLISRGKMVGTVQELAILELHEKKFV
FVLHLDGTLRIWDLASHSRVFSNNMGTMAMAGATFVRLWVGQPYPDSSVIPLAVLYRDTL
DESLEMISLYSVLFNFGDRIVFSMEPSVQNIPLEEGRCLDVKLTLDKIWILKDDELVSHT
LSTNIDEVEAFSHALQEEFVADQLFQSSEHLADEILQITHSIFSSSKDDILPFVSSIFLR
RLLLPGVHHNATLYATLVEYSRHLGESELQTLTTDGLKKEILSLIEHEVGSEKVSLLHCW
KCFFTRYFHNWCKNNALYGLLVDSSSDAVGLIRKKSISLFRSLEDIERIVEGSSDEVSEL
TGLVDIFDDDLECEILIELLRCVISFSQQLGKTASSIFYESLLTTSLISSEDIVCYIVKI
LETGYCMSGPVLQTSTSGNHIVVLEKELADHKSLRKLSVDMFLSLQGLHKKASEWGRILK
VIEGFLKFLVPQKVIQNFNTEVSSNINSSVIVHTTYQIAKVMFESAWDFLLFLSYLVDIS
GQVHLSHDDINKVQLELVPMLQEIIFEWLIIIFFTITPSAPAVTEDFNSKLSSLQIDNNM
GKQLWNEKLGRCDFTLAFIFLLNVGSSSIDHSHVSSEHFSNVQSFINKTRDFISWIIWGQ
AGGSSTFLSRSIDLAFILFKHGQYGAAEQLLMIAEAHLLKEKTSQSIQDDDGGWCIRHHL
LGCCLLAQVQCGLHATQKDKKVSEAIRCFFRSSSGNGASEALQSLSDDLGIPYLGFSGCT
SIAAWKLQYYQWAMQLFERYSISEGACQFALAALEQVDEALYMKDDKCTNNSVNESVTTI
KGRLWANVFIFALDLGRFYDAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCSDKLP
LIGLVEKVEQELVWKADRSDISVKPNLYKLLYAFQLHRHNWRQAASYMYMYSARLRTEAA
LKDCVGSSLMLQERLNALSAAVNALHLVHPAYAWIDSLAEGSSIVNEHYPSKKAKRTPDE
HSAADNDAEPQGWQSSIDIEKLENEFVLTSAEYMLSLVNIKWTFSGKHGALSDLADLLVQ
NSLYDMAFTILFRFFKGSGLKRELERVLSAISLKCCLDKVESTWVEEHSHLLNSSKHEMV
VHGSPVTVSSTPQTDRNSRWATLKLYLEKYKELHGRLPIIVAETLLRSDPKIELPLWLVQ
LFKEGQKERSWGMTGRESNPASLFQLYVSYDRYAEATYLLLECIDSFASMRPADIIRRKR
PLAVWFPYTTIERLLYQLEELIRMGHMVDHCDKLKKMLHGSLQNHLKMLKVDSDDAVSVS
S
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccggttcgaccttggccagtaaggaagttccaatagtcggaagcgacgctgtt
cgctggatcgatctctccgttccgtcttcctccaacattgccgccgttgacgacggcggc
gccgcccctctcaccaccgacgaccgcgcctcctgcttcgtcatcggagatcctcctact
tatcttatctggagaattcacaaggctcagcctcactctctcgagttgctcgaactcgcc
gcttccaaagagtttccgcgcgtaggactcagattcactttccctgatgcgctttgcccc
ttcgctttcatctgcaaaaacgagatttctggtgcttctagagttccttacttgctttac
gtgttgactgtgtctggcgtggcttacctattgaaaattcgaaatgtttctgtgtatgcg
tccgtttctgttttccccgtggatgagcttttggaggttaatgtgcgtggttacattccc
aatcatgctgccacgataactgccgtgacagcaaccgtcgggggtcttgttgttggcaca
agtgatggttctgttttctgtttccagcttggtgtactcgactctagtgctcctggtttc
atgcatgagctgagagatgatgctggaatcagtcgcttgtggggtttaatatcacggggg
aaaatggtgggtactgtacaagagttggcgattttggagttacatgagaaaaagtttgtg
tttgtgcttcatttggatgggacgttacgaatttgggatcttgcatctcatagcagggtt
tttagtaataacatggggactatggcaatggcaggtgctacctttgtaaggttatgggtg
ggtcaaccttacccagattctagtgtaattcctttggcagttttgtacagagacacattg
gatgaaagcttggagatgatctctttatatagcgtcctatttaattttggggacagaatt
gttttttctatggagccttcagtgcaaaacattcccctggaggagggacgatgccttgat
gttaaattaacattggataagatatggatactgaaggatgatgaattagtctcacacacg
ttgtctacaaatattgacgaggtagaagcattttctcatgctttacaggaagaatttgtt
gctgatcaactatttcaaagttcagagcatcttgctgatgaaattttgcagatcacacat
tcaatattttcatcttcgaaggatgatattttgccttttgtatcttctattttcttaaga
aggctgcttcttcctggggttcatcataatgctactttgtatgctactctagttgagtat
agcaggcatttgggtgaatctgagttgcaaacattaaccactgatgggctaaaaaaggag
atactttcactcatagaacatgaggttggatctgaaaaagtgtctttattgcactgctgg
aaatgttttttcacccggtatttccataattggtgcaagaacaatgcgttatatggtttg
cttgttgattcctcttctgatgccgttggtttaatcagaaaaaaatccatttcacttttt
cggtctttggaagatattgaacggattgtggagggctcttcagacgaagttagtgagctc
acaggccttgtggatatatttgacgatgatctggagtgtgaaattctaatcgaattgctc
agatgtgttataagtttcagccaacagttgggcaaaactgcttcttctatattttatgaa
tctcttttaactacatcattgatctcttctgaagatattgtttgctatattgttaagatt
ctggaaactggatattgtatgtctggtccagtgcttcaaacttctacttctgggaatcat
atagttgttctggagaaggagctagctgatcataaaagtttgaggaaactttctgttgat
atgtttttatcgcttcaaggcttgcacaaaaaggcttctgaatggggcaggattttaaaa
gtaattgagggtttcctgaaatttttggttccacagaaagtaatacaaaattttaatact
gaagtgtcatcaaacataaattcttctgttatagtacatactacttatcagattgcaaag
gtgatgtttgaatctgcctgggactttcttctatttttaagctatttggtggacatcagt
ggtcaggtccacttgtcacatgatgatataaacaaagtacagcttgagttagttccgatg
cttcaagaaattatttttgaatggctaatcatcatcttctttaccatcacaccgtctgca
ccggctgtaactgaagacttcaattctaaactttcatcattacaaatagataacaacatg
gggaaacaattatggaatgagaagcttggcagatgtgactttacattggcttttatattc
ttgctcaacgttggaagttcatccatagatcatagccacgtttcttcagaacatttttca
aatgtgcagagttttattaataagacaagagacttcatcagttggattatttggggccag
gctggaggatcttctactttcttgagccgttctattgatcttgcatttatacttttcaag
catggccagtatggtgctgctgagcaattgcttatgattgcggaagcacatttactaaaa
gagaagacatcccaaagtattcaagatgatgatggtggatggtgcatacgccatcatctt
ctaggatgttgcttacttgcacaggtgcaatgtggattacatgcaacccagaaggataaa
aaagtttctgaggccattcgctgcttttttaggtcttcatctggaaatggtgcatctgag
gctctgcagagtttatctgatgacttaggaattccatatcttggctttagtggttgtaca
tcaattgctgcatggaagcttcaatactatcaatgggcaatgcagttatttgaacgttat
agcattagtgaaggtgcttgccagtttgctcttgctgcacttgagcaagttgatgaggct
ctatatatgaaagatgacaagtgcacaaacaactcagttaatgaatcagtgacaaccatc
aaaggacgactatgggcaaatgttttcatatttgcgttagaccttggtcgattttatgat
gcatattgtgcaataatttcaaatccagatgaggagagcaaatacatctgcttgagacgt
ttcataattgttctttatgaacaaggagctataaagattctttgcagcgataaacttccc
cttattggtttagtggagaaagtggagcaagagcttgtgtggaaggctgatcgatcagat
atttctgtgaagccaaacttgtataagttgctttatgcatttcaattgcaccggcataat
tggcgacaagcagcaagctacatgtacatgtattccgctcgtttgagaactgaagcagct
ttgaaagattgtgtaggcagttccttgatgttgcaagagaggctgaatgcactctctgct
gcagtcaatgcactgcatcttgttcatcctgcatatgcctggattgattcattagctgag
ggaagttctattgtgaatgaacattatccaagtaagaaagctaaaagaaccccagatgaa
cattcagcagctgataatgatgctgagcctcaaggttggcagtcctctattgatattgaa
aaacttgagaatgagtttgtgctaacttcagcagagtatatgctgtcactggtaaatatc
aagtggacattttctggaaaacacggagctctatcagacttggctgatcttcttgtccaa
aacagtttatatgatatggcttttacaatccttttcagatttttcaagggttctggactg
aagagggaactggaaagagtgttgtctgctatctcattgaaatgctgtcttgacaaagtg
gaatcaacttgggttgaggaacacagtcatttattgaactcatcaaagcatgagatggtc
gtccatggttcacctgttacagtttcctcgactccacaaactgacagaaacagtcgttgg
gcaacactcaagctttaccttgaaaagtataaggaacttcatggtagattaccgattatt
gttgccgaaactcttctacgctcagatcctaagattgaattacctctttggcttgtacaa
ttgttcaaggagggtcaaaaagaaaggtcgtgggggatgactggcagggaatcaaatcct
gcatctttatttcagctttatgttagctatgatcgatatgcagaagctacttatcttttg
ctcgagtgcatagactcatttgcttcaatgagaccagcagatataattagaaggaaaaga
ccattagctgtttggttcccatacacaactattgagcggctactataccaacttgaggaa
ttaatcagaatgggccacatggtagatcactgtgacaagctcaaaaaaatgttacatggt
tctttacagaatcatctgaagatgttgaaggtggactctgatgatgctgtttctgtatct
tcttga
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integrated database retrieval system
