KEGG   Glycine max (soybean): 100807695
Entry
100807695         CDS       T01710                                 
Name
(RefSeq) autophagy-related protein 18a isoform X1
  KO
K22991  WD repeat-containing protein 45
Organism
gmx  Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmx04131]
    100807695
Membrane trafficking [BR:gmx04131]
 Autophagy
  Other autophagy associated proteins
   Others
    100807695
SSDB
Motif
Pfam: PROPPIN WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_EML Beta-prop_Vps41 WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR19_1st BCAS3_WD40 Beta-prop_IFT140_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_RSE1_2nd Beta-prop_SCAP Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_IFT122_2nd Beta-prop_IFT80_2nd DUF1513 Beta-prop_TEP1_2nd PIR1-like_C CPSF_A Beta-prop_WDR35_TULP_N Lgl_C Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 100807695
NCBI-ProteinID: XP_003553649
UniProt: I1NB39
LinkDB
Position
19:46920537..46923909
AA seq 423 aa
MATLSACASPPWPNPNSPNSNPDPNFLPDQSQTLDFDSLMPPQPESPPPHHHHSPDASPP
ESSPSLPPPSLLYLSFNQDQACFAAAADSGFRIYNCDPFRELFRRDFDGGGIGHVEMLFL
CNIFALVGGGPNPQYPPNKVMIWDDHQGHCIGELSFRAAVRGVRLRRDRIIVVVEQKIFV
YNFADLKLVHQIETVPNPKGLCAVSQLSDSLVLACPGLHKGQIRVEHYAQKKTKFISAHD
SRIACFALTLDGQLIATASTKGTLIRIFDTDHGTLLQEVRRGANTAEICSLAFSSTAQWL
AVSSDKGTVHVFSLKKHSNIPELEKTQSSSNSEAAVTLSNSSRSFIKLKGVLPKYFNSEW
SVAQFHLQEGSHYTVAFGLQKNTVIILGMDGSFYRCQFDPVRGGEMTQLEHRNFLKPEPE
TAL
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggccaccctttccgcatgcgcttcccctccatggccaaaccctaattctcccaattca
aatccagaccctaatttcctccccgatcaatcccaaaccctcgacttcgactccctcatg
cctccgcaacccgaatctccaccgccccaccaccaccactcccccgacgcatcgccgccg
gaatcctccccatcgctcccgccgccgtcgctcctctacctctccttcaaccaggaccag
gcctgcttcgccgccgccgccgacagcggcttccgcatctacaactgcgaccccttccgc
gagctcttccggcgcgatttcgacggcggcggaatcggccacgtggagatgctcttcctc
tgcaacatcttcgccctcgtcggcggcgggcctaaccctcagtacccgcccaacaaggtc
atgatctgggacgaccaccagggccactgcatcggcgagctctccttccgcgccgccgtg
cgcggcgtccgcctccgccgcgaccgcatcattgtcgtcgtcgaacagaagatctttgtc
tacaacttcgcggacctcaagctcgtgcaccagattgagaccgttccaaaccctaagggg
ctctgtgcggtttcgcagctgtccgattctctcgttctcgcgtgccccggtttgcacaag
ggtcagattcgcgtggaacactacgcgcagaagaagaccaagttcatctcagcgcatgat
tccagaatcgcttgcttcgctctcacgcttgatggacagttaatcgccaccgccagcacc
aagggtacgctgattcggattttcgacacagatcacggcacgcttcttcaggaagtgaga
aggggtgcgaatactgctgagatttgtagtttggcattctcttctactgctcagtggcta
gcggtctcaagtgataagggtactgtccatgtattcagccttaagaaacattctaacatc
cccgagctggaaaagacacaaagttcatccaattcagaggctgccgttaccctatctaac
tcatctcgctccttcattaaattgaaaggagtgttgcccaagtacttcaattctgagtgg
tcagttgctcagtttcacttacaagagggctctcattacacagttgcatttggtctccaa
aagaatacagtcattattcttggcatggatggaagcttctatagatgccaatttgatcca
gtacgtggaggggagatgactcagctggaacatcgcaactttttaaagccagaaccagaa
acagccttgtaa

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