Glycine max (soybean): 100807923
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Entry
100807923 CDS
T01710
Symbol
HDA7
Name
(RefSeq) histone deacetylase 6
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03082
ATP-dependent chromatin remodeling
gmx03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100807923 (HDA7)
03083 Polycomb repressive complex
100807923 (HDA7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100807923 (HDA7)
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100807923 (HDA7)
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100807923 (HDA7)
HDAC complexes
Sin3A-HDAC complex
100807923 (HDA7)
BRAF-HDAC complex
100807923 (HDA7)
REST complex
100807923 (HDA7)
SHIP complex
100807923 (HDA7)
MiDAC complex
100807923 (HDA7)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100807923 (HDA7)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100807923 (HDA7)
Chromatin remodeling factors
NuRD complex
100807923 (HDA7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100807923
NCBI-ProteinID:
XP_003525556
UniProt:
I1K037
LinkDB
All DBs
Position
5:complement(3765022..3769384)
Genome browser
AA seq
476 aa
AA seq
DB search
MGMEEESSNNSSIIEGGASLPSTGSDAKKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAH
NLIVHYSLHRRMEINRPFPASPADIRRFHSDDYVDFLSSVSPETLADSAFSRHLKRFNVG
EDCPVFDGLFPFCQASAGGSLGAAVKLNRADADIAINWAGGLHHAKKSEASGFCYVNDIV
LGILELLKVHRRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGVG
SGKNYAVNVPLNDGMDDESFRSLFRTIIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLS
VRGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYF
GPDYTLYVDPSNMENLNTPKDMEKIRNTLLEQISQLPHAPGVPFQTTPPTLQLPEEAEED
MDRRPKLRKWDGEDYDSDPDEGGKANSKFPNVTAHMRDITDEMEEEKPEVHPSSCC
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggaatggaagaggagagtagcaacaacagcagcatcatagaaggtggtgcttcgctg
ccatcaacgggttcagacgccaagaagcgaagagtgacgtacttctacgagcccacgatc
ggcgattactactacggtcaggggcacccaatgaagccgcaccgaatccgcatggcgcac
aacctcatcgtccactactccctccaccgccgcatggagatcaaccgtcccttcccggcc
tcccccgccgacatccgccgcttccactccgacgactacgtcgactttctctcctccgtc
tcccccgagaccctcgccgattccgccttctcccgccacctcaagcgcttcaacgtcggc
gaggactgccccgtcttcgacggcctcttccccttctgccaggcctccgccggcggctcc
ctcggcgccgccgtcaaactcaaccgcgccgacgccgacatcgccatcaattgggccggc
ggcctccaccacgccaagaagtccgaggcctctggattctgctacgtcaacgacattgtc
ctcggtatcctcgaactcctcaaagttcacaggcgcgtgctgtatgttgacattgatgtt
caccatggtgatggtgttgaggaggccttttacaccactgatagagtgatgacagtgtct
ttccataagtttggggactttttccctggcacaggacacgtcaaggacattggggtggga
tcaggaaagaattatgcagtcaatgtcccattaaatgacggaatggatgatgagagtttc
cgtagtctgtttcgaaccatcattcaaaaagtcatggaggtctatcaaccagaggcagtt
gttctacaatgtggagctgattcattgtctggggacaggttgggttgcttcaacttgtct
gtgagaggtcatgcagattgccttcgttttcttagatcgttcaatgttcctttaatggtc
ttgggtgggggtggatatacaattcggaatgttgcccgttgttggtgttatgagacagca
gtggcagtaggagtggagcctgataataagttgccttataatgaatattatgaatatttt
ggcccagattatactctctatgtcgatccaagcaacatggagaacctaaacacacccaag
gatatggaaaaaataaggaacacactactagaacagatttctcaacttccccatgctccc
ggtgtaccttttcagacaacaccacctaccttacaacttccggaagaggcagaagaggac
atggatagaagacctaaacttcgcaaatgggatggtgaagattatgattctgatcctgat
gaaggtggaaaggctaattccaagtttccaaacgtcactgcccatatgagggacattaca
gatgaaatggaagaagagaaaccagaagtgcatccatcatcttgttgttga
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