Glycine max (soybean): 100808039
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Entry
100808039 CDS
T01710
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100808039
03036 Chromosome and associated proteins [BR:
gmx03036
]
100808039
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100808039
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100808039
SLIK complex
100808039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
CHDCT2
Motif
Other DBs
NCBI-GeneID:
100808039
NCBI-ProteinID:
XP_006575632
UniProt:
A0A368UIJ7
LinkDB
All DBs
Position
2:complement(48147085..48167538)
Genome browser
AA seq
1766 aa
AA seq
DB search
MAFFRNFSNDTVSHGVMEDKSQGQNANRVHRSVGNDCTDATSSEKEFDMNMEAQYDSDGE
PDGSSRLQTEATADDGDAVKESNLQTTGSKTAMVGRWGSTFWKDCGQMDPQNGSESGQES
KSGSDYRNADGSEDNSLDGRAGRLDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQDG
EEQSDSLHYGGIKKPTGSNSWPQRMSTSANRTLHRNLRFSDDVEDNDGEDEDDDDGDNDN
DGDDADYEEEDEADEDDPDDADFEPATSGHAANKDKDWEGEGSDEDDDSDANIVVSDDDE
PFYAKRPKGRQRGKIGQNIKSTRERKVYAASGRQRRVKSSFEDNESTTEDSDSDGDEDFK
STKKRSVHVRKNNGRSSAATGFSSRNSEVRTSSRTVRKVSYVESEESEEADEAKKKKSQK
EEIEEDDGDSIEKVLWHQPKGMAEDAQRNNRSTEPVLMSHLFDSEIDWNEIEFLIKWKGQ
SHLHCQWKSFAELQNLSGFKKVLNYTKKIMEDIRYRRTISREEIEVNDVSKEMDLDIIKQ
NSQVERIIADRISNDNSGNVIPEYLVKWQGLSYAEATWEKDIDIAFAQHAIDEYKAREAA
MAVQGKMVDSQRKKSKASLRKLEKQPEWLKGGELRDYQLEGLNFLVNSWRNDTNVILADE
MGLGKTVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIIYVGTRAS
REVCQQYEFYNEKKPGKPIKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQ
LYTTLSEFSTKNKLLITGTPLQNSVEELWALLHFLDPDKFRSKDEFVQNYKNLSSFNENE
LANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHNLNKGVR
GNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSGSSDNSKLERIVFSSGKLVILDKLLV
KLHETKHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDF
CFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSV
EEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILRFGAEELFKEE
RNDEESKKRLLSMDIDEILERAEKVEEKETDGEQGNELLGAFKVANFCNDEDDGSFWSRW
IKPDAVFQAEEALAPRSARNIKSYAEVDPSERSNKRKKKEPEPPEQVPKRRKAEYSAHAV
PMIEGASVQVRNWSYGNLSKRDALRFSRSVLKYGNESQIDLIAAEVGGAVGAAPPGAQIE
LFNALVDGCTEAVELGNLDAKGPLLDFFGVPVKANDLLTRVQQLQLLAKRIGRYEDPVAQ
FRVLSYLKPSNWSKGCGWNQIDDARLLLGIHYHGFGNWEKIRLDERLGLMKKIAPVELQH
HETFLPRAPNLKDRANALLEQELAVLGVKNANSRVGRKPSKKERENMINLSLLRGQEKKK
KSSSVNVQMRKDRFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMVEEMKTL
KRLHRLQQTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEQEPYKQDRMTVRLWKYVST
FSHLSGERLHQIYSKLRQEQDEAEVGPSHTNGSVSVSFSRNGNPFRFHMERQRGLKNMAT
YQMPEPVDNTGKSEAWKRRRRTESDNHFQGQPPPQRTVSNGVRIADPNSLGILGAGPSDK
RFASEKPYRTQPGGFPSRQGFSSGIK
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atggctttctttaggaacttttcaaatgatacagtctcacatggtgtcatggaagataaa
agccaaggacagaatgctaatagagttcatagatcagtaggtaatgattgtactgatgca
acttctagtgagaaggaatttgatatgaacatggaggcacagtatgatagtgatggcgaa
ccagatggttccagtagactgcaaactgaggcaacagctgatgatggagatgctgtgaaa
gaatcaaacttgcagactactggtagtaaaacagctatggtcggaaggtggggttcaaca
ttttggaaggactgtgggcaaatggaccctcaaaatggttctgaatctgggcaggaatca
aaaagtggatcagattatagaaatgcagatgggtctgaagataattcattggatggaaga
gcgggaagattagactcagatgatgatgatggacaaaaggaggcaggaaaaggtccaaga
ggtcactctgatgttcctgctgaagagatgttgtctgatgagtattatgagcaggatggg
gaagagcaaagtgactcattgcattatggtgggatcaaaaagcccactggatcgaattca
tggccacaacggatgtcgacctctgcaaatagaactttgcataggaatttgaggttttca
gatgatgttgaagataatgatggtgaggatgaagatgatgatgatggtgataatgataat
gatggtgatgatgctgattatgaagaagaggatgaagcagatgaagatgatcctgatgat
gcagactttgagcccgccacaagtggtcatgctgcaaacaaggataaagattgggaaggt
gaaggctcggatgaagatgatgacagtgacgcaaatatagttgtctccgatgatgatgaa
cctttctatgctaaaagacctaaaggaaggcaacgaggtaagattggacaaaacataaaa
tctaccagagaacgtaaagtgtatgctgcatctggtcgacaaagaagagttaaatcgtct
tttgaggacaacgagtcaacaacggaggattccgacagtgatggtgatgaggatttcaaa
agcacaaaaaagcggagtgttcatgtccgcaagaacaatggtcgctcgtctgcagccaca
ggcttttcttcgcgcaacagtgaggttcgcacttctagtaggacggttaggaaggtatca
tatgttgaaagtgaagagagtgaagaagctgatgaagcgaaaaagaaaaagtcccaaaag
gaagaaattgaagaggacgatggtgactccattgaaaaggtgctctggcatcagccaaag
ggcatggctgaagatgctcaaaggaataatagatcaacagagcctgttttaatgagtcac
ttgtttgattcggaaattgattggaatgagattgaatttttgataaaatggaaagggcag
tcacatttgcactgtcagtggaagtcttttgctgagcttcaaaatctcagtggttttaag
aaggttttgaattatacaaagaaaataatggaagacatcaggtacaggaggacaatctca
agagaggagattgaggtcaatgatgttagtaaggagatggatttagatattatcaaacag
aacagtcaggtggaaagaataattgcagataggatcagcaacgataattctggcaatgtt
attccagaatacttggtcaagtggcaaggactatcttatgctgaagcgacctgggaaaag
gacattgatattgcttttgctcaacatgctattgatgagtacaaggctcgtgaggctgct
atggcagttcaaggaaagatggtagattctcagcgtaagaagagcaaagcaagtttgcgg
aagcttgagaaacaacctgaatggttgaagggtggagagctccgtgattatcaacttgag
ggtctgaattttcttgttaacagttggagaaatgatacaaatgtcattttagctgatgaa
atgggccttggaaaaactgttcagtcagtatcgatgcttggttttctacagaatgcccag
caaatccatggtccttttcttgtagttgttccattgtccactttatcaaattgggccaaa
gaattcaggaagtggcttcctgatatgaatattatcatatatgtaggtactcgtgcaagt
cgagaggtttgtcaacaatatgaattttataatgagaaaaaacctgggaagccaataaaa
ttcaatgcactgttgactacatatgaagtagttttgaaggataaggctgttctctccaag
atcaaatggaattatctgatggtggatgaggctcataggctaaaaaatagtgaggcacaa
ttgtatacgacactttcagaatttagcaccaagaacaaattgcttatcactggcactcct
ctacagaacagtgtggaagaactatgggctttgcttcatttccttgatccggacaagttc
aggagcaaggatgaatttgttcagaactataagaatctgagttcttttaatgagaatgag
cttgcaaatctgcatatggaattgagacctcacatacttcgaagagttatcaaagatgtg
gagaaatcattaccccccaaaattgaacgtatccttagggttgaaatgtctcctcttcag
aaacagtattataagtggattttggaacgtaattttcacaatttgaacaaaggagttcgt
gggaatcaggtttctcttttaaatattgtggtggaattaaagaagtgctgcaaccatccc
ttcttgtttgaaagtgctgaccatggctatggtggggactcaggaagtagtgacaacagt
aaactagagagaattgtttttagcagtggcaagcttgtcatacttgataagctgcttgtt
aaattgcatgaaaccaagcatcgtgttctgattttctctcagatggttaggatgttagat
atactgggagagtatatgtcacttcgagggtttcaatttcagaggcttgatggcagtaca
aaagctgagcttcgacaacaagcaatggatcatttcaatgcacctggtagtgatgatttt
tgcttccttctttcaacacgggcaggaggtctgggtatcaatcttgctacagcagacact
gttataatatttgattctgattggaatcctcaaaatgacctgcaggcaatgagtagagct
catagaattggacaacaagaagttgttaacatttatagatttgtgacaagcaaaagtgtt
gaggaagatattttggaacgtgctaagaagaaaatggttctggaccacttggtgattcaa
aagctaaatgcagagggtaggctggagaagaaagaagccaaaaaaggaggaagttatttt
gacaaaaatgagctgtctgcaatcttacgattcggagcagaggagctttttaaagaagaa
agaaatgatgaagaaagcaagaaacgactgttaagtatggatatagatgagattcttgaa
agagcagagaaggttgaagagaaggaaactgacggggaacaaggaaatgagttattaggt
gcttttaaggttgccaatttttgcaatgatgaagatgatggaagtttctggagccgttgg
ataaagcctgatgctgtatttcaagcagaggaagctcttgctcctcgatcggctagaaat
attaaaagctatgcagaggttgatccatctgaaagaagtaataaaagaaaaaagaaggaa
cctgaaccacctgagcaagttccaaaacgccggaaagcagagtattctgctcatgcagta
ccaatgattgagggagcatctgtccaagtgagaaattggtcatatgggaatttatctaaa
agagacgcacttcgtttttctcgttcagttttgaaatatggcaatgagagccaaatcgac
ttaattgctgctgaggttggtggtgctgttggggcagctccacctggagcacagattgaa
cttttcaatgctcttgttgatggttgtacagaagcagtagaacttggaaatctagatgca
aaggggcctttgctggatttttttggtgtaccagtgaaggcaaatgatctacttacccgt
gtccaacaacttcagcttttggcaaagcgcattggtcgatatgaagatcctgtcgcacaa
tttcgcgttctgtcatatctcaaaccatcgaactggtccaaaggttgtggatggaatcaa
attgatgatgctagattacttcttggaatacattaccatgggtttggtaattgggaaaag
attagattggatgaaagacttggccttatgaaaaaaattgctcctgtagaacttcaacac
catgaaactttcttgccacgagctccaaatttgaaagaccgtgctaatgcccttttggag
caagaacttgctgttcttggtgtgaaaaatgccaacagcagagttggacggaagccttcc
aagaaagagagagaaaatatgattaatttatcactgttacgtgggcaggagaaaaagaaa
aaatcgagttctgttaatgtccaaatgagaaaggatagatttcagaaaccccagaaggtt
gaatctatagtaaaggaagagggtgaaatgtctgacaatgaggaagtatatgagcagttt
aaggaggtaaaatggatggaatggtgtcaagatgtgatggttgaagaaatgaaaactttg
aaacgtcttcacaggttgcagcaaactagtgccaatcttccaaaggaaaaggtgctttcg
aaaatacgcaactatttacaacttcttgggagaaggatagatcaaattgtgttagaacat
gaacaggaaccctataagcaagatagaatgaccgtgcgactgtggaaatatgtctccact
ttttcccatctttcaggggagaggcttcatcaaatatattccaaacttagacaggagcaa
gatgaggcagaggttggcccctctcacacaaatggatcggtatctgtttcatttagcaga
aatggaaatccattccgtttccatatggagaggcaaagaggattaaaaaatatggctacc
tatcaaatgccagaaccagttgataatactgggaaatccgaggcatggaaacgaagaaga
agaactgaaagtgacaatcacttccagggtcagccaccacctcaaaggaccgttagtaat
ggagtccggattgctgatcctaactcactcgggatcctaggtgctgggccgtcggacaaa
cgctttgctagtgagaaaccttataggacacaacctggtggttttccttcaagacaaggc
ttctcttcaggtataaagtaa
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integrated database retrieval system
