Glycine max (soybean): 100808189
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Entry
100808189 CDS
T01710
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
gmx
Glycine max (soybean)
Pathway
gmx04142
Lysosome
gmx04144
Endocytosis
gmx05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100808189
04142 Lysosome
100808189
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100808189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100808189
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100808189
Membrane trafficking [BR:
gmx04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
100808189
Exosome [BR:
gmx04147
]
Exosomal proteins
Proteins found in most exosomes
100808189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
100808189
NCBI-ProteinID:
XP_003518313
UniProt:
I1JHE9
LinkDB
All DBs
Position
2:complement(43402465..43416551)
Genome browser
AA seq
1706 aa
AA seq
DB search
MAANAPITMKETLTLGSVGINQQFITFTHVTMESDKYICVRETGPQNSVVIIDMSMPMQP
LRRPITADSALMNPNSRILALKAQVPGTTQDHLQVFNIETKAKMKSHQMKEQVVFWKWIT
PNTLGIVTQTSVYHWSVEGDGEPMKMFDRTANLANNQIINYRCDPNEKWLVLIGIAPGSA
ERPQLVKGNMQLFSVDQQRSQALEAHAASFATFRVAGNDKESTLICFASKSLNAGQVTSK
MHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVSMQISNKYGLIYVITKLGLLFVYDLE
TSTAVYRNRISSDPIFLTTEALSVGGFYAINRRGQVLLATINEAAIVPFVSGQLNNLELA
VNLAKRGNLPGAEELVVKRFQELFSQTKYKEAAELAAESPRGILRTPDTVAKFQSVPVQA
GQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVK
TVDNDLALKIFIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYMFLLQTILRADAQG
AVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKSNLPEHGYLQTKVLEI
NLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLFIRALQHYSELPDIKRVIVNTHAIE
PQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQTAKEYCEQLGVDACIKLFEQFKS
YEGLYFFLGAYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMETK
LPDARPLINVCDRFGFVPDLTHYLYTSNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPED
FIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDSN
NNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVSNKNSLFKLQARYV
VERMNADLWEKVLNPENEFRRQLIDQVVSTALPESQSPDQVSAAVKAFMTADLPHELIEL
LEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEANLYEE
AFAIFKKFNLNVQAVNVLLDNLRTIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIES
FIRADDSTHFLEVIKASEDAEVYHDLVRYLLMVRQNTKEPKVDSELIYAYAKIDRLGEIE
EFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARKA
NSSKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEFYQNRGCFNELISLMESGL
GLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWMELTYLYIQ
YDEFDNAATTVMNHSPEAWDHMQFKDIIVKVASVELYYKAVHFYLQEHPDILNDLLNVLA
LRVDHTRVVDIMRKAGHIRLVKPYLIAVQSNNVSAVNEALNEIYVEEEDYDRLHESIDLH
DNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDCMETCSQSGDR
ELSEDLLVYFIEQGKKECFASCLFVCYDIIRPDVALELAWMNNMIDFAFPYLLQFIREYT
GKVDELIKDKIEAQKEEKAKEKEEKDVIAQQNMYAQLLPLALPAPPMPGMGGGGYAPLTT
PPMGGMGMPPMPPFGMPPMGGSSGSY
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaacgcccctatcaccatgaaagagaccttaacgctgggaagcgttggaatc
aaccagcaattcattacatttactcatgtgacaatggaatcggataagtacatttgtgtc
agggaaactggacctcagaacagtgttgtcatcattgacatgagcatgccaatgcagcct
ttgagacggcccataactgccgattcggctttgatgaaccccaattctagaattcttgct
ctcaaagcccaagtgccgggaaccactcaggatcatttgcaagtttttaacattgaaacg
aaagcaaagatgaaatcgcatcagatgaaagaacaggttgtcttttggaagtggataact
ccaaatacactgggaattgtcactcagacgtctgtatatcattggtcagttgagggcgat
ggtgaaccaatgaagatgtttgatcgaacagctaatctggctaataaccaaataattaat
tatcgttgtgatcctaatgaaaagtggttggttttgattggaattgctcctggttcagca
gagagaccacaactagtaaaaggaaacatgcaactcttctctgtggatcagcaacgtagt
caggctcttgaagcacatgctgcctcgtttgctacatttagagtggctgggaatgataag
gaatctactcttatttgttttgcatcaaagagtttgaatgctggacaggttacatcaaag
atgcatgtcattgaacttggtgcccagccaggcaaaccatcatttactaagaaacaagca
gatctgttcttccctccagactttgctgatgactttcctgtgtcaatgcagatttcaaat
aaatatggattgatttatgtcatcacaaagcttgggctgttatttgtctatgatctggag
acttcaactgcagtttatagaaaccgaatcagttccgatcctatatttttgaccacagaa
gcactttcagtagggggattttatgccatcaatagacgtggccaggtgttgcttgctact
ataaatgaggcagccattgtaccttttgttagtggccagctaaataatttggaacttgct
gttaatctggctaaaagaggaaacctccctggtgcagaagaattggttgtcaagcggttt
caagaattattttctcagaccaagtataaggaggctgcggagctcgctgcagaatctcca
cgaggaattcttcgaactcctgacactgttgctaaatttcagagtgtacctgtgcaagct
gggcagacgccaccactgttgcagtactttggtactctgttaaccaggggaaaactcaat
tcttatgagtcattggaactgtcacggcttgtggtaaatcaaaacaaaaagaatcttttg
gaaaattggctagcagaggacaaacttgaatgcagtgaggagcttggtgaccttgtgaag
acagtggataatgacctcgcattgaaaatatttatcaaagccagagccacaccgaaagtt
gttgcagcatttgctgagaggagggaatttgacaagattctgatatactcaaagcaggtt
ggatacacgcctgattacatgttccttctgcaaacaatattacgggcagatgcccagggt
gctgtaaattttgctctgatgatgtctcaaatggaggggggttgccctgttgactacaac
acaataactgatctctttcttcagaggaatttaatccgcgaggcaactgcctttttattg
gatgtgctgaagtcaaacctaccagaacatggatatcttcaaacaaaggtactggaaatt
aatcttgtgacctttccaaatgttgctgatgctatattggccaatggcatgtttagtcat
tatgaccgtccacggattgctcagctttgtgaaaaggctggccttttcattcgggctctt
cagcattattccgaattgcctgacatcaaacgtgtcattgtgaatacacatgccatcgaa
ccacaggctctagttgagttctttggaactctttcaaaagaatgggcgctagagtgcatg
aaagatcttttactggtcaaccttaggggcaaccttcaaataattgtgcagactgccaag
gaatattgtgaacagctcggtgtagatgcatgcattaaactctttgagcaattcaagtcc
tatgaaggactatactttttcttgggtgcatatttgagctctagcgaggatcctgatatt
cacttcaagtatatcgaagcagctgctaaaactggacaaattaaggaggtggagcgtgtt
actcgggaatcaaacttttatgatgctgagaagacgaagaactttctaatggagaccaag
cttccagatgcacggccattaataaacgtgtgtgatcgttttggttttgttccagatctc
acccattatctctacaccagcaacatgctgcgttatattgagggatatgttcaaaaggtg
aatccaggaaatgctcctctagttgtaggacagttgttagatgatgaatgccctgaggat
ttcattaaaggtcttattctttcagttcgttctcttcttccagttgagcctttagttgaa
gaatgtgagaagagaaatcgtctccgcttgcttactcagtttttggagcatcttgtaagt
gagggaagccaggatgtgcatgtgcataatgctctgggtaaaattatcattgacagtaat
aacaatcctgagcattttcttacaaccaacccatattatgattctcgtgttgttggtaaa
tattgtgagaagcgggatcctacacttgctgttgttgcttaccgaagggggcaatgtgat
gatgagcttgttaatgtttccaataaaaattccttgttcaaactccaagccagatatgtt
gtggaacgtatgaatgctgacctctgggagaaagttcttaatcccgagaatgagtttaga
agacagttgattgatcaagtggtgtccactgctttgcctgaaagccagagtcctgatcaa
gtttccgctgcagtgaaagcttttatgactgctgatcttccccatgagttgattgagctt
cttgaaaagattgtgctacaaaattctgctttcagcggaaactttaatctacaaaatttg
ttgatcctcactgcaatcaaggcagatccctcaagagtcatggattacattaataggctg
gacaactttgatggccctgctgttggggaggtggcagtagaagcaaacctatatgaagaa
gcttttgccattttcaaaaaatttaatttgaatgttcaagctgttaatgtcctactagat
aaccttcggaccattgatcgagctgtggagtttgcattccgggttgaagaagatgctgtc
tggagccaagtggctaaggcacaactaagagaaggcttagtaagtgatgcaattgagtca
ttcatccgtgcagatgattccactcacttcttagaggttataaaagcttctgaagatgca
gaagtataccatgacctagtaaggtaccttcttatggttaggcagaataccaaagagccc
aaggtggacagtgagctcatatatgcatatgcaaagattgacaggcttggagaaattgaa
gagtttatattgatgccaaatgttgctaatttaccaaatgttggagaccgtttgtatgat
gaggctctctatgaggctgcaaaaattatatttgcttttatttcaaactgggctaagtta
gcagtgacattggtgaagcttaaacaattccaaggtgctgttgatgctgctaggaaagca
aacagttcaaaaacatggaaggaagtttgttttgcttgtgttgatgctgaggaattccga
ttggctcagatttgtggtctcaatgtcatcattcaggtggatgatttggaagaggttagt
gagttttaccagaacagaggatgctttaatgaactgatatctctaatggagagtggactt
ggactggagcgtgcccatatgggtatctttactgagttgggagttctttatgcaagatat
cgtcctgagaagttaatggagcacattaagttattctcaactcggcttaacattcccaag
cttattcgagcctgtgatgagcagcagcattggatggaacttacatacttatacatccaa
tatgatgagtttgataatgctgcaaccactgtaatgaatcactctcctgaagcatgggac
cacatgcaattcaaagatattatagttaaggttgcaagtgtggagctctactataaggct
gttcacttctacttgcaagaacatcctgatattttaaatgatcttcttaatgtacttgcc
ctacgtgtggaccacacccgtgttgtggatataatgcggaaggctggccacattcgattg
gttaagccgtacttgattgcagttcaaagcaataatgtgtctgctgttaatgaagctttg
aatgaaatttatgttgaggaggaggactatgatagacttcatgaatcaatagatctgcat
gacaacttcgatcagataggtcttgcacagaagattgagaagcatgagcttcttgagatg
aggcgtgtcgctgcttatatttacaagaaagctggaagatggaagcagtccattgctttg
tcaaaaaaagacaatctttacaaggactgtatggaaacttgctctcaatctggtgaccgt
gaactctcagaggatttgcttgtttactttattgagcaggggaagaaggaatgttttgca
tcttgcctcttcgtctgttatgatataatacggccagatgttgctcttgagctagcttgg
atgaacaatatgattgattttgctttcccatacctcttacagtttattcgagagtatact
ggtaaagttgatgagcttatcaaggacaaaattgaagcacagaaagaggagaaagctaaa
gagaaggaagagaaggatgttattgctcagcagaatatgtatgcccagttactaccactt
gctttgcctgcaccaccaatgccaggtatgggtggaggaggctatgctccactgacaaca
ccccctatgggtggtatggggatgcctccgatgccaccttttggaatgcctccaatgggc
ggcagcagcggctcctactga
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integrated database retrieval system