Glycine max (soybean): 100808522
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Entry
100808522 CDS
T01710
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100808522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100808522
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100808522
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
LRR_6
DUF7885
F-box-like
DUF3630
Motif
Other DBs
NCBI-GeneID:
100808522
NCBI-ProteinID:
XP_006584931
UniProt:
I1KQQ6
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Position
8:4548239..4553679
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AA seq
579 aa
AA seq
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MMECRRKKENQNPNSTFPDEVLERISGMLKSRKDKSTVSLVCKEWYNAERWSRRSVFIGN
CYSVSPEILTRRFPNIRSVTLKGKPRFSDFNLVPANWGADIHSWLVVFAGKYPWLEELRL
KRMTVTDESLEFLALQFPNFKALSLLSCDGFSTDGLASIATNCKNLTELDIQENGIEDKS
GNWLGCFPDSFTSLEVLNFANLHNDVNFDALEKLVCRCKSLKTLKVNKSVTLEQLQRLLV
HVPQLGELGTGSFSQELTAQQCSDLESAFKNCRNLHTLSGLWVATAQYLPVLYSACTNLT
FLNFSYAPLDSDGLAKLLVHCPKLQRIWVVDTVEDKGLEAVGSHCPLLEELRVFPADPFD
EGIVHGVTESGFIAVSQGCPRLHYVLYFCRQMTNAAVATVVQNCPDFTHFRLCIMHPGQP
DYLTQESMDEAFGAVVKTCTKLQRLAVSGYLTDLTFEYIGKYAKNLETLSVAFAGSSDWG
MRCVLDGCPKLRKLEVRDCPFGNGALLSGLGKYESMRSLWMSDCNLTMNGVRLLAKEMPR
LNVEVIKEETYETHQAKKVYVYRSVAGPRRDAPPFVLTL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtgtaggagaaagaaggagaatcaaaatcccaactccactttccctgatgag
gtgttggagcgaatttcagggatgttaaagtcccgcaaggacaaaagcacggtttctttg
gtttgcaaagagtggtacaacgcagagagatggtcaaggaggagtgtgttcataggtaac
tgctactctgtgtctcctgagatcttaactcgcaggttcccaaacattagaagtgttaca
ctgaaagggaagcctcgtttctctgacttcaacttggttcctgccaattggggtgctgat
attcattcatggcttgtggtgtttgctggcaagtacccttggcttgaggagttgaggctc
aagaggatgactgttactgatgagagcttggagtttctggctctccaattccccaatttc
aaagcactttcccttctcagttgtgatggattcagcactgatggactggcttcaattgcc
actaattgcaagaatttaactgaacttgacatacaagagaatggtattgaggataagagt
ggcaattggttgggttgtttcccagacagcttcacatcattggaagtattgaactttgcc
aatctgcacaacgatgtaaattttgatgcactcgagaaactcgtctgtaggtgcaaatca
ttaaagactttgaaggttaacaaaagtgtgacactagaacagttacaaaggcttcttgtt
catgttcctcagttaggtgaacttggtactggctcattttcacaagagttgacagcacag
cagtgctcagatcttgaaagtgcgttcaaaaattgtagaaatcttcacaccctttcaggg
ttatgggtagctacagcacaatatctcccagttctgtactctgcttgcacaaatctaact
ttcttgaattttagttatgctcctcttgacagtgatggtcttgctaagcttcttgttcac
tgtcctaagcttcagcgcatctgggttgtggacactgttgaagacaaggggctagaagct
gttggatcacactgtccattgcttgaggaactgcgtgtttttcctgcagatccctttgat
gagggcattgttcatggggttactgaatcagggtttattgcagtctctcaaggatgtcca
agacttcactatgttctatacttttgccgtcaaatgaccaatgctgctgttgctactgtt
gtgcaaaactgtcctgactttactcatttccgactttgcatcatgcaccctggtcagcca
gattacttgacgcaagaatcaatggatgaggccttcggagctgttgttaagacttgcact
aaactccagaggcttgcagtatcaggttatctgactgacctaacttttgagtatataggc
aagtatgcaaaaaacttggaaactctttcggtggcttttgctggaagcagtgattggggc
atgcgctgtgtgctggatggctgtccgaagctgagaaaactcgaggtaagggactgtcca
tttggcaatggggctcttctgtcaggcttgggcaagtatgagtcaatgagatcgctgtgg
atgtcagactgcaatttgacaatgaacggcgttagattgttggccaaagaaatgcctagg
ttgaatgttgaagtcataaaggaagaaacctatgagactcatcaggctaaaaaagtttac
gtttatcgttctgttgctgggccaagaagggatgcccctccttttgttctcactctctga
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