Glycine max (soybean): 100809048
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Entry
100809048 CDS
T01710
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100809048
09123 Folding, sorting and degradation
03018 RNA degradation
100809048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100809048
03041 Spliceosome [BR:
gmx03041
]
100809048
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100809048
mRNA degradation factors
5'-3' decay
Lsm complex
100809048
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100809048
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
100809048
NCBI-ProteinID:
XP_003531507
UniProt:
A0A2K7H095
C6SWT2
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Position
8:complement(13827217..13831931)
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AA seq
98 aa
AA seq
DB search
MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEELDSSLDLSKLRAHPLKPVIH
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgggcctggacttgaatctctagtagatcagacaatttcagtcattacaaat
gatggacgaaatatagtgggagtcctgaaaggttttgaccaggcaacaaatattattctt
gatgagtcccatgaacgggtttattctacaaaggaaggtgtgcaacaacttgttcttggt
ttgtacatcatcaggggtgacaatataagtgttgttggtgaactggatgaagaactagat
tctagtctggatttgtcaaaactcagagctcatcctttgaaacctgttatccattga
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