KEGG   Glycine max (soybean): 100809048
Entry
100809048         CDS       T01710                                 
Name
(RefSeq) sm-like protein LSM8
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
gmx  Glycine max (soybean)
Pathway
gmx03018  RNA degradation
gmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100809048
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100809048
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100809048
   03041 Spliceosome [BR:gmx03041]
    100809048
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100809048
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100809048
Spliceosome [BR:gmx03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100809048
SSDB
Motif
Pfam: LSM RimP_C
Other DBs
NCBI-GeneID: 100809048
NCBI-ProteinID: XP_003531507
UniProt: A0A2K7H095 C6SWT2
LinkDB
Position
8:complement(13827217..13831931)
AA seq 98 aa
MSAGPGLESLVDQTISVITNDGRNIVGVLKGFDQATNIILDESHERVYSTKEGVQQLVLG
LYIIRGDNISVVGELDEELDSSLDLSKLRAHPLKPVIH
NT seq 297 nt   +upstreamnt  +downstreamnt
atgtcagctgggcctggacttgaatctctagtagatcagacaatttcagtcattacaaat
gatggacgaaatatagtgggagtcctgaaaggttttgaccaggcaacaaatattattctt
gatgagtcccatgaacgggtttattctacaaaggaaggtgtgcaacaacttgttcttggt
ttgtacatcatcaggggtgacaatataagtgttgttggtgaactggatgaagaactagat
tctagtctggatttgtcaaaactcagagctcatcctttgaaacctgttatccattga

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