Glycine max (soybean): 100809136
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Entry
100809136 CDS
T01710
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100809136
03036 Chromosome and associated proteins [BR:
gmx03036
]
100809136
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100809136
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100809136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HHH_9
Tex_central_region
HTH_44
HHH_3
SH2
OB_PDCD11
Motif
Other DBs
NCBI-GeneID:
100809136
NCBI-ProteinID:
XP_006604309
UniProt:
I1N8M6
LinkDB
All DBs
Position
19:complement(38821290..38841451)
Genome browser
AA seq
1649 aa
AA seq
DB search
MAKGVISDEEDDVELDEEEREPVDGDELEEGRDVDNEEEDEEEEGQDEYENDGFIVDDIE
DEEEEDEEEERAESDDERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLK
KGRRDTEEEPSGLSDEEEFVGSGKVGRTAEEKLKRSLFGDDEGAPLEDIAEEEEQGEEEE
DADIGEDDEMADFIVDEEEVDENGAPMRQKKLKRKKTRQAPGVSSSALQEAQELFGDPDE
LILNRQKNLEMSEFRETRLEDEFEPIVLSEKYMTEKDDRIRELDIPERMQISDESTGAPP
LDASSIDEESQWICKQLKDGAISWIPKKISNSQNNEEDDLPVDKDDIIRFLELHHVQKLD
IPFIAMYRKEDCLSLLKDLEHPEAGDDNWDKNDKTPTLKWHKVLWALQDLDKKWLLLQKR
KSALQSYYNKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAGSEKEIDDVDSKFNLHFP
PGEAGVDEGQYKRPKRKSMYSTFSKAGLWEVASRFGCSPEQLGLCLTEVNLQELEDPKET
PEEMASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIRKYVRSHFLDHAVVSTCPTADGN
TTIDSFHQFAGVKWLREKPLSKFDDLQWLLIQKAEEEKLIQVIIKLPEQYLNKLIDQFNE
YYISDSVSRSAQLWNDQRKLILHDAIFRFLLPSMEKEARGVLASKAKNWLLMEYGKALWT
KVSVGPYQQKENDLGSDDEAAPRVMACCWGPGKPLTTFVMLDSSGEVLDVLYTGSLTFRS
QNVNDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVG
HEMDGLSIVYGDESLPRLYENSRISSEQLPSQQGIVRRAVALGRYLQNPLAMVATLCGPR
KEILSWKLSPLESFLNPDDKFAMVEQVMVDVTNQVGLDINLAISHEWLFAPLQFVSGLGP
RKAASLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDD
TRIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEQYASGK
KRQNKIQTFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKIVQVTVRRV
QAQKAICGLESGMTGILLKEDYTDDWRDIIELSDRLHEGDMLTCKIKSIQKNRYQVFLVC
KDSEMRSNRLQNNRDIDPYYHEDRSCFQSDQDKARKEKELAKKHFKPRMIVHPRFQNITA
DEAIEFLSDKDPGESIIRPSSRGPSYLTLTLKINDGVYAHKDIVEGGKEHKDITSLLRIG
KTLKIGEDTFEDLDEVMDRYVDPLVAHLKAMLNYRKFRKGTKAEVDELLKMEKAEYPMRI
VYSFGISHEHPGTFILTYIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVAYFQRHIDDP
QHDSAPSIRSVSAMVPMRSPATGGSSGASGGSGWGGGSNSEGGWRGHSYDRGDRSSTPGS
KTGRGEYRNNGNQDEHPSGVPRPYGGGRGRGRGRGSYNNRGDNSNNERQDSGYGGRWGSN
NTKDSDDGLSNFPGAKVQNSPGREAFPGGWGGGGSGGGGASNSDNGGWEQASGGAGPSDG
EQGSSGWGSATKKAASGNGWGSGNSGGGW
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggcgtaatctcagacgaagaagacgacgtcgaactcgacgaggaagagagg
gaacccgtcgacggtgacgaattggaagagggtcgcgatgtagacaacgaagaagaggac
gaagaagaggaagggcaggatgaatatgaaaacgatgggtttatagtggacgacattgag
gacgaagaggaggaggatgaagaagaagagagagcagaaagtgatgatgagcgacagaag
aagaaaaagaggaagaaaaaggaggagtatgtccttgatgaagatgattatgaattgctg
gaggacaataatatcaatattcatcgtcggaaggagagcaaaaagttcaagcggctgaaa
aaaggcaggagggataccgaggaggagccctctgggctgtctgatgaggaggagtttgtt
ggaagtggtaaagttgggcgaactgctgaggagaagcttaaacgcagtttatttggtgat
gatgaaggagctccacttgaagacattgctgaagaggaggagcaaggagaagaggaagag
gatgcagacattggagaagatgatgaaatggccgacttcattgtggatgaagaagaagtt
gatgagaatggggctcctatgaggcagaagaagctgaagagaaagaaaactaggcaggct
cctggagtctcttcttcagctctacaagaagctcaagaattatttggtgatccagatgag
ttgattctgaatcgccagaaaaatctagaaatgagtgaatttagagagactagacttgaa
gatgaatttgagcctattgttctttctgagaaatatatgacagagaaggatgaccggatt
agggagcttgatattcccgagagaatgcagatatcagatgagagtactggtgctcctccg
ttggatgcaagtagtatagatgaagagagtcaatggatttgcaagcaacttaaagatgga
gcaatctcttggattcccaagaagatttcaaactcccagaataatgaagaggatgactta
ccagtcgacaaggatgatattatcagatttttggaactgcatcatgtgcaaaaattagat
attccttttattgctatgtatcggaaggaggactgcttaagcctattaaaagacctagag
caccctgaagctggtgatgataattgggataagaatgacaagacacctactctgaaatgg
cacaaggtactttgggctcttcaggacttggacaagaagtggttgcttcttcagaagcgg
aagagtgccctccagtcatactataataaacggtttgaagaagagtcccgtcgtgtgtat
gatgaaacaagactaaacttgaatcgtcaattgtttgaatcagttatgagatcgctgaag
gaagcaggatctgagaaggagattgatgatgttgactccaagttcaacttgcatttccca
cctggcgaagctggtgttgatgaaggacaatacaagaggcctaaaaggaagtctatgtat
agcactttcagtaaggctggtctttgggaggttgcaagcaggtttggatgtagtcctgag
caacttggattatgtctaactgaagttaacctgcaagagttggaagatccaaaggaaaca
ccagaagagatggcttccaactttacatgtgctatgtatgatacccctgaagaagtactt
aaatgtgccaggcacatggcagctgttgagataagttgtgagcctagcattaggaaatat
gtacgtagccactttcttgatcatgcagttgtctcaacttgtcctactgctgatggaaat
acaacaatagattctttccatcaatttgctggggtgaagtggctgcgggagaagcctttg
tctaagttcgatgatttgcaatggctccttatacagaaagcagaagaggagaaactcatt
caagttattattaaactgcctgagcagtatcttaataagttaatagaccaattcaatgaa
tattatattagtgacagtgttagcagatctgctcaactgtggaatgatcagaggaaattg
atactgcatgatgccatttttcgattccttttaccatcaatggaaaaagaggcaagaggt
gtcttggcaagtaaagcaaagaattggttacttatggaatacgggaaagccttatggact
aaggtttctgtgggaccttatcaacagaaggaaaatgatcttggctcagatgatgaggct
gctcctcgggttatggcgtgctgttggggccctggaaagccactaacaacttttgtcatg
ttagattcatcaggtgaagtgcttgatgtgctttacactgggtcacttacctttaggtca
cagaatgttaatgaccaacaacggaagaagaatgaccaggaacgggtgttgaagtttatg
accgatcaccaaccacatgttgttgttttaggagcagttaacttgtcttgcacccgtttg
aaggaagatatatatgaggtcatttttaagatggtggaggaaaatcctagagatgttggg
catgaaatggatgggctcagcattgtctatggggatgaatctcttcctcgtctttatgaa
aattctagaatttcctctgaacaacttccttctcaacaaggtatagtgaggcgagctgtt
gctcttggacgttatctccagaacccattggcaatggttgcaacattatgtggacctaga
aaggaaatactgtcatggaaactgagccctttggagagttttctcaacccggatgataaa
tttgcaatggtcgagcaggttatggtagatgtcaccaatcaggttggcttagacattaat
ttagcaataagtcatgaatggttatttgctccgttacaatttgtttctgggcttggtcca
cggaaggctgcatccttacagagatcccttgtaagagctggtgcaatttttactcggaag
gactttctgactgaacataaacttggtaaaaaggtgtttgtcaatgcggttggtttcttg
cgtgtccggcgaagtggtttagctgctagcagcagccaatttattgatttgctggatgat
acacgaattcatcctgaatcttatattcttgcacaagagttggccaaagatgtgtatgaa
gaagatggcacaggtgatgcaaatgatgatgatgatgcactggagatggccatagagcat
gtgagagaccgacctagttatttgaaaaaccttgatgttgagcaatatgcttctgggaaa
aaacgtcagaataaaatacaaactttctatgacataaaaagagaattgattcaaggtttt
caggattggcgtaagcaatatgaagaaccaagtcaagatgaggaattctatatgatttca
ggtgagactgaagagacccttgctgaaggcaaaatcgtccaagtcacagttcgcagagtg
caagcccagaaagcaatatgcgggcttgaatctggaatgactggaatcctcttgaaagaa
gactatacagatgactggagagatataattgaattatctgataggctacatgaaggtgac
atgctcacttgtaaaattaagtcaatccaaaagaataggtatcaagtcttccttgtatgt
aaggatagtgaaatgagaagtaatcggttacagaataaccgtgatattgacccctattac
catgaagaccgaagctgttttcagagtgatcaagacaaagctaggaaagaaaaggagctt
gcaaaaaagcatttcaagccaaggatgattgttcatccacgctttcagaacataactgca
gatgaagcaatagagttcttgtctgacaaagatcctggagaaagtattatccgtcctagt
tcacgaggaccttcatatcttactttaactctcaaaattaatgatggagtatatgcccat
aaggatatagttgaaggtgggaaggaacacaaggacattacaagcttactccgaattggg
aagacactaaaaattggagaggacacttttgaggacttagatgaggttatggaccgctat
gttgatcccttggtggctcacttaaaggcaatgttaaactatcgcaaattccgaaagggt
acaaaagcagaagttgatgaacttttgaagatggagaaagccgagtatccgatgcgcata
gtctatagttttggcatctcccatgaacatcctggcacatttatattaacttacataaga
agtacaaatccacaccatgagtacattgggctttacccaaaaggattcaggtttaggaaa
aagatgtttgaggacatcgataggcttgtagcatattttcagaggcatattgatgatccc
cagcatgattcagccccttcgattagatctgtgtctgctatggtaccaatgcgaagccct
gcaactggtggctcatctggggcatctgggggtagtggttggggtggtggttcaaacagt
gagggtggctggagaggtcactcttatgataggggggatcgatcatctactcctggttcc
aagacaggacgaggtgaatacagaaacaatgggaatcaggacgaacatcctagtggagtg
cctcgtccatatggtggtggacgaggacgtggtcgtggccgaggttcttataataataga
ggagacaactccaataatgaaagacaggactctggttatgggggcagatggggttctaat
aatacaaaggattctgatgatggtttaagcaattttccaggggccaaggttcagaattct
cctggaagagaagcttttcctggtggttggggtggtggtggaagcggtggaggtggagct
agtaacagtgacaatggtggctgggaacaagcaagtggtggtgctggtccaagtgatggt
gaacaaggaagctctggctggggatctgccacaaagaaagcagcatctgggaacggatgg
gggtctggaaattctggcggtggttggtga
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integrated database retrieval system
