Glycine max (soybean): 100809277
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Entry
100809277 CDS
T01710
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100809277
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100809277
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100809277
NCBI-ProteinID:
XP_003552152
UniProt:
I1N2D3
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Position
18:41975243..41982469
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AA seq
451 aa
AA seq
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MKVLSPKLFTLSILLAALVLASANAVSGNEMQKHEATESRDVVEEEKLQVQSLKNSSMAE
RSGSALNEHAVDNPEEIASMVDESIRNYTARRNLNFFSCGSGNPIDDCWRCDKRWYARRK
RLANCGIGFGRNAIGGRDGRYYVVSDPGDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVI
TLKQELIMNSFKTIDGRGVNVHIAYGACITIQFVTNVIIHGLHIHDCKVTGNAMVRSSPS
HYGWRTLADGDGISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVML
LGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPT
INSQGNRYLAPLNPFAKEVTKRVDTGSSVWKSWNWRSEGDLLLNGAFFTSSGAGAAASYA
RASSLGAKSSSLVGTITSGAGVLNCRRGAMC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgctgtctccaaaattgttcactctcagtattctgctcgcggcgctggtttta
gcttccgccaacgcagtcagcggcaatgagatgcagaaacatgaagccacggaatcaagg
gatgtggttgaagaagagaagttgcaagtgcagagcttgaagaattcgtcaatggcagaa
aggtcagggagtgctttgaatgaacatgcagttgataatccagaggagattgcttccatg
gttgatgagagcatacgcaactacacggctcgaaggaacctgaacttcttctcatgcggg
tccgggaacccaatcgacgactgctggcggtgcgacaagcggtggtacgcccgccgcaag
cgcctagccaactgcggcatcggtttcggccgcaacgccatcggcggccgcgacgggcgc
tactacgtcgtgtcggaccccggcgacgacgacccagtcaacccgaaacccggcaccctc
cggcacgccgtgatccaggaccgccccctctggatcgtgttcaagcgcgacatggtcata
accttaaagcaagaactcatcatgaacagcttcaagaccatcgacggccgcggcgtgaac
gtccacatcgcttatggtgcgtgcatcaccatacagttcgtcaccaacgtgatcatccat
gggttgcatattcatgactgcaaggtgactgggaacgccatggttcggagctctccttcg
cattatggttggaggacccttgctgatggagatgggatctccatctttggctcgagtcat
atttggattgatcataactcgctgtcgaattgcgctgatgggcttgtggatgctgttatg
gggtccactgctattactatttccaacaactacttcacccaccacaacgaggttatgcta
ctgggtcacagtgactcttatgtccgcgacaagcagatgcaagtaaccattgcttacaac
cattttggggagggacttatccaaagaatgcccaggtgcaggcatgggtatttccacgtg
gttaacaacgactatacccactgggtaatgtatgcaattggaggcagtgctaaccccaca
attaatagccagggcaacagatacctcgcccctctgaacccttttgctaaagaggtgaca
aagagagtggacacggggtcatccgtatggaaaagttggaattggagatctgaaggagac
cttttgctcaatggagcctttttcacttcatcaggagcaggagctgcagcaagctatgcc
agagcctcaagtttgggggcaaaatcgtcttctttggttggtaccatcacctctggagct
ggtgttcttaactgccgcaggggtgccatgtgttaa
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