Glycine max (soybean): 100809794
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Entry
100809794 CDS
T01710
Symbol
TIR1A
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1A
KO
K14485
transport inhibitor response 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100809794 (TIR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100809794 (TIR1A)
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100809794 (TIR1A)
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_6
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
100809794
NCBI-ProteinID:
NP_001345172
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Position
2:16116651..16119928
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AA seq
585 aa
AA seq
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MRPRVAYSFPEEVLEHVFSFIECDKDRGSISLVCKSWYEIERWCRRRVFVGNCYAVSPAT
VVNRFPKVRSIAIKGKPHFADFNLVPEGWGAYVGPWIKAMAAAYPWLQEIRLKRMVIADE
CLELIAKSFKNFQVLVLTSCEGFTTDGLAAIAANCRNLRELELRESEVDDICGHWLSHFP
DSYTSLVSLNISCLGNEVNLSALERLVSRCPNLQTLRLNRAVPLDRLATLLRGAPQLVEL
GTGAYTTEMRPEVFTNLAEAFSGCKQLKGLSGFWDVLPSYLPAVYPICSNLTSLNLSYAT
IQSPDLIKLVGQCESLQRLWVLDYIEDAGLEVIAASCKDLRELRVFPSDPFGLEPNVALT
EQGLVSVSEGCTKLQSVLYFCRQMSNAALDTIARSRPNMTRFRLCIIEPRAPDYLTHQPL
DAGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGC
DNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCLVSYGACKLLGQKMPRLNVEVIDE
RGPPDSRPESSPVEKLYIYRTVSGPRLDMPGYVWRMQDDSALRIS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgagagtagcgtactcgttccctgaggaggtgctggagcacgtgttctccttc
attgagtgcgacaaggaccgcggctcgatctccctcgtctgcaagtcctggtacgagatc
gagcgctggtgtcgccggagagtcttcgtcggaaactgctacgcggtctctccggccacc
gtcgtcaaccgcttccccaaggttagatccatcgccatcaaggggaagccgcacttcgcc
gacttcaatttggtccccgagggttggggcgcttacgtgggcccctggatcaaggccatg
gccgctgcctacccctggcttcaggagatcaggctcaagaggatggtcatcgccgacgaa
tgcttggaactcatcgccaaatcgtttaagaacttccaagtcttggtcctcacctcttgc
gagggcttcaccactgatggacttgcagccattgctgccaattgcaggaatttgagggag
ttggagttgcgggagagtgaggtggacgacatctgtgggcattggctgagccattttcct
gattcgtacacatcactggtttcccttaacatttcttgcttaggcaatgaggtgaatttg
tctgccctagagcgcctggttagtaggtgtcccaatctccagacgctccgcctcaaccgt
gctgtgccactagacaggcttgccactcttcttcgcggtgctcctcagttggttgagttg
ggcaccggagcttacacgacagagatgcgaccggaggtcttcacaaaccttgcggaggca
ttttctgggtgcaagcaattgaagggcttatctggattttgggacgtgctcccttcctac
cttccagctgtctatcctatttgctccaacctgacttcactgaacttgagttatgcaact
attcaaagccctgatcttatcaagcttgttggtcaatgtgagagtttgcagcggttatgg
gtgctggattacatagaagatgctggccttgaagtgattgctgcatcctgtaaggatcta
agggagttgagggtgtttccgtccgacccgtttgggttagaaccaaatgtagcattgaca
gagcagggcctcgtttcggtgtctgaaggctgcaccaagctccagtcagttctatatttt
tgtcggcaaatgtctaatgctgccttagatacaattgccaggagcaggcctaatatgaca
cgttttagactatgtattattgagcctcgagctcctgactatctcacccatcaacctctg
gatgctggttttggagctattgtagagcattgcaaggatcttcagcgactttccctttct
gggcttctaactgaccgtgtttttgagtatattgggacttatggtaagaagcttgagatg
ctttctgtggcttttgctggagatagcgatttgggactccatcatgtgctgtctgggtgt
gacaaccttaggaagctggagatcagggactgcccctttggtgacaaagcccttttggcc
aatgctgcaaagctggagacaatgcgatccctttggatgtcctcttgcttggtgagttat
ggagcatgtaaattgctgggtcagaaaatgccaagacttaatgttgaagtcattgatgaa
agaggacctccagattcaaggccggagagtagtcctgttgagaagttatacatatacagg
actgtttctgggccaagattggacatgccaggctatgtatggagaatgcaagatgattct
gcattaaggatttcttga
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