Glycine max (soybean): 100809967
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Entry
100809967 CDS
T01710
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100809967
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100809967
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
100809967
NCBI-ProteinID:
XP_003533578
UniProt:
K7LFX4
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Position
9:47290307..47305717
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AA seq
1247 aa
AA seq
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MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPEIPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNDILQGNYVDHHVSTREQITLQDSMEGVIYTTSQFGLDERFGDGDASQIGLDLDEVL
LNDKAATSEHDGFGANIQMSHQNDEKKQEIDDLPTAAELSEYAEGPSTPGLEEPNLFGTQ
MDQGNNEVDYHNSADLISLEAAPKESSDHQRENDVINCSLQNNGNHISFDLHHEDNACDL
VEMNSKKEEQEHLACQVVMKDQENLIPNDHCLTLLPLVDSSNKDYTECEGGMINASDVAE
KEDLQDGVLMNNDPVSAALDQTITNCVVSAPLMNNENVASSGCSHVTSDQEDLSCKPLSN
MDGSWGPGFDGRLEDGNTLSKHEVLNGIEISKSEGQFCPFDDARVSNVISPLRSPGRPEV
VDEEAQASQELKEAETLNHVSLEAVQPAESILQPCTSHLGQPSRSFIEGEKCHVTDVSNP
ALSYQGTIEPSVFKETPDSGKTDMQLESQIFSDKVESINKSAAADMPEPEKLLSAYQHDG
EANHLLMASTPDNQGATEGHTGAAGVKCISGKKRSYTESTLTVQSMDLIESYGGAQSKRT
AESVPDDDDLLSSILVGRKSSVLKMKPSPAAPEIASMKCVRSASAPRTSALKRKVHMDDM
MVLHGDTIRQQLTNTEDIRRIRKKAPCTRHEILMIQRQFLEDEIFHEPIFTDLSTDLTIL
RNETFDLTGIKVFDYGLDSSSVEKTNDQESYSRTDTEIDGVEGNNEPMAVQLQENAEVQP
TEVVEGNNEPMAVQPQEDAEVQPTEVPVLSESHQSEVNLGSRDIDAHGHMDIISHVEELD
SSQNVELNNVRANIEVSEAGNCSVGPGHESSSLTEVFKNDFAASLSRVDKTNDLVDSIHT
NILSIPNAENLNTIPILEDDFVEDQSDKNGVGAIECSMETGTQVQTDGLEANDLYASLAI
GSKETDEFTDIQASFNGDLPLEENRNNLLGQLNEDQIVASGMECDGKDARSDCIFIENAK
VDCLQSEALGLDEKESSLKDAEIPVCQEAGLQITMCPEIRSPFVDQNDENDMIANDTVFL
NVGDDEIIDDDDYQSCAEGTNLENSGWSSRTRAVAKYLQTVFDKEDLHGRKELHLDNLLV
GKTRKEASRMFFETLVLKTRDYVHVEQTKPFANVSIKPRMKLMQSDF
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgttttactctcagtttattttggccaagaaagggccacttgggactatatggatagct
gcgcatttggagaggaagctccgcaagaaccaggtggcggataccgacattggcgtctcc
gtagattccattctttttcctgaaataccaatcgcactccgtttgtccagccatcttcta
cttggtgtggtgaggatatattctaggaaggtgaattacctttttgatgactgcagtgaa
gccttgcttaagattaagcaagcttttcgttccacagcagttgatttgccacctgaagag
tccactgcaccttaccattccatcaccttacctgagacttttgatcttgatgattttgag
ctaccagataatgacattcttcaaggtaactatgttgatcaccatgtcagtactagggag
cagattacactgcaagattctatggagggtgtgatttacactacttcacagtttggcttg
gatgagcgctttggtgatggtgatgcttctcaaattgggttagaccttgatgaggttttg
ttaaatgacaaagctgctacttcggagcatgatggctttggtgctaatattcaaatgtct
catcaaaatgatgaaaagaaacaggagattgatgatttacccactgctgctgaactcagt
gaatatgctgaaggtccatcaacccctggactggaagagccaaatttatttggaactcag
atggatcagggcaataatgaagttgattatcataattcagcagatttaatatcattggag
gccgcaccgaaagaatcgtcggatcaccaaagggagaatgatgtaattaattgctccttg
caaaataatgggaatcatatttcttttgatttgcatcatgaagataatgcctgcgatctg
gttgaaatgaatagcaaaaaagaggagcaggagcatttagcatgtcaggttgtgatgaag
gatcaagaaaatttgatacctaatgatcattgcttaactttgttacccttggtggactct
tccaataaagactacacagaatgtgaaggtgggatgatcaatgcttctgatgtagctgag
aaggaggacttacaagatggagttttgatgaacaatgacccagtttctgctgctttggat
caaactattacaaattgtgttgtttctgctcctttgatgaacaatgaaaatgttgcttct
tctggttgttctcatgttacttctgatcaagaggacctctcatgtaaaccgttgtctaac
atggatggatcttggggtccaggatttgatggtcgtttggaggatggtaacacattatca
aagcatgaagttctgaatggcattgaaatttccaagagtgaggggcaattctgtccattt
gacgatgctcgagtatccaatgttattagtcctctacgatcacctggtagacctgaagtt
gttgatgaggaagctcaggcctctcaagaactgaaggaagcagagactttaaaccatgta
tctcttgaagctgtgcagcccgctgaatcaatccttcagccatgcacctcccatcttggc
cagccttctcggtcatttattgaaggtgaaaaatgtcatgtaactgatgtttcaaatcct
gctttaagttaccaagggactatagagccatctgtatttaaagaaacgcctgattcgggg
aaaacagatatgcaacttgagagtcagatatttagtgacaaagtagaaagtataaacaaa
tctgctgctgctgacatgccagagcctgaaaagttgctctcagcttaccagcatgatggt
gaagcaaatcatttgctgatggcatctactcctgacaatcagggtgcaactgaaggccat
acaggtgcggcaggagtaaaatgcatctctggtaaaaaacgtagctacacagaaagtact
cttacagtgcagagtatggatttaattgaatcttacgggggagctcaatccaagagaact
gctgagtctgttcctgatgatgatgatctattgtcatccatattagttggtagaaaatct
tcagtcttgaaaatgaaacccagtcctgcagcccctgaaatagcatcaatgaagtgtgtt
cgttctgcttctgcaccacgtactagtgccttaaagaggaaggtgcatatggatgatatg
atggtcttgcatggcgatacaatacgccaacagttgacaaatacggaagacattcgtcgc
atacgcaaaaaagctccttgcactcgtcatgagattttaatgattcaaagacaatttttg
gaggatgaaattttccatgaaccaatatttacggatttgtctactgatttgactattctg
cgaaatgagacatttgatctgactggaatcaaggtttttgattatggtttagatagttct
tccgtagaaaaaacaaatgatcaagagtcctattctagaacagatactgaaattgatgga
gtggagggtaataatgaacctatggcagtccaactccaagaaaatgcagaagtacaacct
acagaagtagtggagggtaataatgaacctatggcagtccaaccccaagaagatgcagaa
gtgcaacctactgaggtacctgttttgtctgagagtcatcagtctgaggttaacttggga
tctcgtgatattgatgctcatgggcacatggatattatttctcatgtggaggagcttgac
agttctcaaaatgttgaattgaacaatgtcagagcaaatattgaagtttctgaagcaggg
aattgctctgttggccctgggcatgaatcttcatccttaactgaagtcttcaaaaatgat
tttgccgcatcactgtctcgcgtggataaaaccaatgatcttgttgattctatccacaca
aatatattgagcattccaaatgctgagaatttgaatacaatccctattctagaggatgac
tttgtggaggatcaaagtgataaaaatggagtaggtgctattgaatgtagcatggaaact
ggaacacaagttcaaacagatggcttggaagccaatgatttatatgcatccttggctatt
ggttctaaagaaactgatgaatttactgatattcaagcttcctttaatggtgacctacca
ttagaggaaaatagaaacaacttgctagggcagttaaatgaggatcaaattgttgcttct
ggcatggagtgtgatggcaaggatgcaaggtctgactgcatatttattgaaaatgctaaa
gtagattgtttacaatctgaagcacttggtttagatgaaaaagagagttcattgaaagat
gcagaaatcccagtctgtcaggaagctggactacaaattacaatgtgccctgaaattagg
agtccttttgtggatcagaatgatgaaaatgacatgattgctaatgacacagtgtttttg
aatgttggtgatgatgagataattgatgatgatgattatcaatcatgtgctgaaggaact
aaccttgaaaatagtggatggtcttccaggaccagggctgttgccaagtatctgcagact
gtgtttgataaggaagatctacatggaaggaaggagctgcatcttgacaatttattagtt
ggtaaaacacggaaggaagcatctcggatgttttttgaaactctggttctcaagaccagg
gattatgtccatgtagaacagacaaaaccctttgcaaatgtcagcataaaacctcgaatg
aagcttatgcagtcagatttctga
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