Glycine max (soybean): 100810235
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Entry
100810235 CDS
T01710
Name
(RefSeq) protein argonaute PNH1 isoform X2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100810235
03036 Chromosome and associated proteins [BR:
gmx03036
]
100810235
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
100810235
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100810235
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
100810235
microRNA pathway
RISC loading complex
100810235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
100810235
NCBI-ProteinID:
XP_003524004
LinkDB
All DBs
Position
4:complement(31925635..31944805)
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AA seq
965 aa
AA seq
DB search
MSETYNLCHKITFFRFLLPIWNICLLLPTFSLLLRDKNKVKLACVCFPQNYTAKCKMKDP
EEHPVKSRRPLQKSAERRRRCRRRSQCKIEKMQETELDSHLGFSSATCKSLVFHQRPGFG
QLGTKCVIKANHFLADISVSDLSHYNVIITPEVTSRKTSKAIIAELVRLHRNTDLATRLP
VYDGGRNLYTAGLLPFTYKVFNVTLSVDDDATGGTRERDFKVVIKFATRVSMHQLRELLS
GKQVNNPQEALSVFDIVLRELAAQSYVSIGRFLYSPDVRKPQQLGGGLESWRGFYQSIRP
TQMGLSLNIDMSSMAFIEPLPVIDFVAQILGQDVHSKLLSDADRIKIKKALRGVKVEVTH
RGNFRRKYRISGLTSQPTRELVFPLDEQMNMKSVVDYFQETYGFTIKYSHLPCLQVGSQR
KVNYLPMEACKIVGGQRYTKGLNEKQITSLLKISCQRPREQETDILQTIQQNNYENNPYA
KEFGISIENKLASVEARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVRYWAC
INFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPIYSARPDQVKKALKYVHSAAIDK
LDGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKIN
VKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSCPSIAAVVASQDWPEVTK
YAGLVCAQPHREELIQDLFRCWKDPQRGVVYGGMIRELLLSFKKATGQKPLRIIFYRDGV
SEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFANNHDDRNSTDKSGN
ILPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYT
YARCTRSVSVVPPAYYAHLAAYRARFYMEPDVAEITKLRGTRLKEGPVRPLPALKEKVKN
VMFYC
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacgtataacttgtgccataaaataaccttctttcggtttcttcttcccatc
tggaatatctgtcttcttcttccaaccttctcccttctcctaagagacaaaaacaaagtg
aaactggcttgtgtgtgttttccacagaactacactgccaagtgtaaaatgaaggatcca
gaggagcacccagtgaagtctagaaggcctcttcagaaatctgcagaacgtagaagaagg
tgcaggagaaggagccagtgcaagatagagaaaatgcaagaaacggaacttgattcacac
cttggtttctcttctgccacttgcaagagtcttgtgtttcatcaaaggcctggctttggc
caacttggtactaagtgtgtcatcaaagctaaccactttcttgcagatatatcagtttct
gacttgagccattacaatgttataataacacctgaagtcacttctcgtaaaacaagcaag
gctatcatagcagagttggtgaggcttcacaggaacactgacttagccacgaggctccct
gtgtatgatggagggagaaacctttacactgccggtttgcttccttttacttacaaagtg
ttcaatgtaacattgagtgtggatgatgatgctaccggtggtaccagggaaagggatttt
aaggtggtaatcaagtttgcaactcgtgtcagcatgcatcagctacgtgagcttcttagt
gggaaacaagtgaacaatccgcaggaagcgctaagtgtctttgacattgtgctaagggag
ctagcggctcagagttacgtgtcgattgggaggtttctctattctccggatgtaagaaaa
ccacagcagttgggtggtggccttgaatcatggaggggcttctaccagagtataaggcct
actcagatgggattgtcacttaacatcgatatgtcatcaatggcttttattgaaccacta
cctgtgattgactttgttgctcaaattttgggacaagatgtgcactcaaagttgttgtcg
gatgcggatcgtatcaagatcaaaaaggccctaagaggtgtaaaagttgaagttacacat
agaggaaattttcgaaggaagtatagaatatcaggactgacttcacagcctacaagggag
ctagttttccctctcgatgagcaaatgaacatgaaatcagtagttgattattttcaagaa
acgtatggatttactatcaaatattctcatctgccttgtcttcaagtaggaagtcaaagg
aaggtgaactatttgccaatggaggcatgcaagatagtcggaggccagagatatacaaaa
gggctaaatgaaaagcagataacttctctgctgaagatctcatgtcaaaggccccgcgaa
caagagacagacattttgcagacaattcaacaaaacaattatgagaataatccctatgca
aaggagtttggcatcagcatagagaacaagcttgcatcagttgaggctcgggttcttcca
gctccatggttgaaatatcacgacactggaagagagaaagaatacttgccacaagttggt
cagtggaatatgatgaacaagaaagttataaatggaagtactgtaagatattgggcgtgt
atcaacttctctcgaagtgtacaggagagtacagctcgtggattttgccaacagttagtt
cagatgtgccaaatctcaggcatggaattcagtcaggaccccgtgattcctatatattcg
gcaagaccagatcaggtaaagaaggctttgaagtatgtacattctgctgctatagacaaa
cttgatgggaaagagctagagttgctgattgccattcttccagacaataatggctctctc
tatggtgatctcaaaagaatctgcgaaacagatctggggttgatttctcaatgctgcctt
acaaaacatgtattcaagatcaatagacagtacctggctaatgtggcactaaaaatcaat
gtcaagatgggaggaagaaacacagtacttttggatgctttaagttggaggattccactt
gttagtgatattccaacaataatatttggagccgatgtaactcatccagaatcaggagag
gattcttgtccatccattgctgctgttgtagcctcccaggactggcctgaagtaacaaag
tatgcaggactggtttgtgctcagcctcatcgagaagaactcattcaagaccttttcaga
tgctggaaagatccacagaggggtgtagtttatggtggtatgattagggagcttttacta
tcatttaagaaggcaacaggacaaaaaccattgagaataatcttttacagggatggggta
agtgagggacagttctaccaggttttgctatatgagcttgatgccattcgcaaggcttgt
gcatccttggaacctagttaccaacctccagtaacatttgtagttgttcaaaaacggcat
cacactagactcttcgcaaacaatcatgacgacagaaatagcactgataagagtgggaat
atcttacctggtactgtggtagattctaagatctgtcatccttccgaattcgacttctac
ttatgcagtcatgcaggaattcagggtacaagtagaccagcacactatcatgtcctctgg
gacgagaacaatttcactgcagatgaaattcagtctctaaccaataatttgtgctacact
tatgcaagatgtacacggtctgtttcagtagtgcctccagcatattatgctcatctagca
gcctacagggctcgattctacatggaacctgatgttgctgagattacaaaactgcgagga
acaagattgaaagaagggcctgttcggccactgcctgctctgaaagagaaggtgaagaat
gttatgttttactgttga
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