Glycine max (soybean): 100810238
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Entry
100810238 CDS
T01710
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100810238
03015 mRNA surveillance pathway
100810238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100810238
03041 Spliceosome [BR:
gmx03041
]
100810238
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100810238
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100810238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
100810238
NCBI-ProteinID:
XP_006592181
UniProt:
I1LQL7
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All DBs
Position
12:complement(4299656..4305885)
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AA seq
890 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMEVIKPWITRRVTELL
GFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKELWMLLLSAQKNASGVPQ
QFLDAKEEELLKKKAESDLIASEIQRKKDKEGREIMEERLKKLDGGFDSKDNDTASDPTL
KPRDSGYYERDGKETDKRNGVRARSRFSRSPHSPAVSTSPHRGSPSRSMSKSFSNSRSYS
GGRHRSRSISRSPEARGRSRSFERIRHSPRRRSISPHRHSPRRSPYRRIPYSRRSRSPSP
VRRRMHSPVHRRSPSFRRRRSPSLVRRRRPPSPVRRRRSPSPVRRRRSPSPGRRRRSPSP
GPRHRSPSPGPRHKSPSPGRHHRSPSPLGRRRSLSPRRRRSVVTRHRSPSLVRRIPPTNV
RRRSDSPMQSPSPIRRRYGSRTPPHSPSPLRRRSPIPGKQRSPSISPQRSPRDEWSSQSP
IRRVSPSPIRKNSPRHKRSPLPSSMGRVRTQERLSSETRQPSSPLGSTRRDKSGKASHYK
SQDSMSTQEKSPIRSVSPEERSETSSEGRSPHESPMKQRREKLSNERSMSPLKKQRTQKP
SRDSPDTREEAEETYYSRESRDPKMNSSQKISKHSPISKRKGSPAKFRHEDFSPERVSGH
TASEHHYDNDDWSKKGREIKRDKSSRQDNEFPAQKSSINKETFSREKPQESYAVDVKKSD
DKDQSRSNYAKSSGRHHKSEATQDLVGKGDRVNHSASYDSVSEDSGKHRREGKDRKRHKR
SEKKYASSDEDYSDDSELEDRKEAKRRRKEEKKLRKEEKRRRREEKRRRREERRAEKLKM
KSKTDDISDDEEAKQMGYHQSDSEDEQKKLEIELRNKALESLKAKRGVNN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtttctttagaggcacatctgcggatcaggacactcggttttcgaacaag
caagcgaagctgatgaaatcgcagaagtttgcaccggaattggagcatctggtggacatg
acgaaggtgaatatggaagtgattaagccttggatcaccagaagggtgaccgagcttctt
gggtttgaagatgaagtgcttattaacttcatacacagtcttctggatgcaaaggaagtg
aatgggaaagaagttcaaatacaaattacaggatttatggaaaagaacactggaaagttc
atgaaagagctttggatgctgcttctcagtgcgcagaaaaatgccagtggtgttcctcag
cagttcttggatgccaaggaagaagaactcctgaagaagaaggctgaaagtgatctgatt
gcaagtgaaattcagaggaaaaaagataaggaaggtagagagatcatggaagagaggttg
aagaaactggacggtggatttgattcgaaggataatgatactgcatcagatccaactttg
aagcccagggattcagggtactacgagcgggatgggaaggaaactgataagaggaatggt
gtaagagcaaggagcaggttttctaggtctccacattcacctgcagtttccacttcgcct
catcgaggctcaccttcaaggtcaatgagcaaatcattttcaaattctcgaagttattca
ggtggtagacacaggtcaaggagtatatctaggtctccagaggctcgaggtcgctctcgt
tcttttgaaaggattcgtcattctccacgacgacggtctatttctcctcacaggcattca
ccacgacgttctccttataggaggataccttattcaagaagatctagatctccttctcct
gtacgacgtagaatgcattctccagttcatcgtagatcaccatcttttcgacgacgtaga
tcaccttctcttgtgcgacggcgtagaccaccttctccagtacgtcgacgtagatcacct
tcccctgtgcgtcggcgtagatcaccttcccctgggcgccgacgtagatcaccttccccc
gggcctcgacacagatcaccttctcccgggcctcgacacaaatcaccttctcctgggcgc
catcatagatcaccatcacctcttggacgacgaaggtcactctcacctagacgacgaaga
tcagttgttactcggcataggtcaccttcactagtacgccgaataccaccaaccaatgtg
cggagaagatcagactcccccatgcaatccccctcccccatacgacgaaggtatggtagt
agaactcctccacactctccatctccattgcgacgtagatcacctattcctggtaagcaa
agatctcctagtatctccccacagaggtctcctcgagatgaatggagttctcaatctcca
atacggcgtgtatctccatctccaatcaggaaaaattctccaagacacaaaagaagtccc
ttgccgtcttctatggggagagtcagaacacaagaaagattgtcatctgagactcggcaa
ccctctagtcccctggggtctacacgaagagataaaagtggcaaagcttcacactataaa
tcacaagattcaatgtccacacaagagaagtctccaattcgatctgtatctccagaagag
aggagtgagacaagcagtgaaggtcgaagtcctcatgagagccctatgaaacaaagaaga
gaaaagttgtccaatgaaagaagcatgagtcctctgaagaaacaaagaacccagaaacct
agccgtgacagcccagatacaagagaagaagcagaagaaacatactattccagagaaagc
agagatccaaaaatgaattcatcacaaaagatatcaaaacattcccccatcagtaagcga
aaaggttcacctgcaaaatttcgtcatgaggatttctctcctgaaagggtgtcaggtcat
acagcttctgaacatcattatgataacgatgattggagtaagaaaggccgggagataaaa
cgtgataaatcttccagacaggacaatgaatttcctgctcaaaagtcatcaatcaacaaa
gaaactttttccagggagaagcctcaagaatcttatgctgtagatgttaaaaaatcagat
gacaaggaccaatcccgttcaaactatgccaaaagtagtggtcgacaccacaaatccgaa
gccactcaagatttagttggaaaaggtgatcgtgtcaatcacagtgcttcatatgattct
gtttctgaggatagtggtaagcatagacgggagggaaaggataggaaaaggcataaaagg
tctgagaaaaagtatgcatcttctgatgaggattatagtgatgattctgagttagaggac
aggaaagaggctaagaggaggagaaaagaggagaagaagctgcggaaggaggagaagcgt
cgaagacgtgaagagaagcgacgcagaagggaagaacggcgtgcagagaagctgaaaatg
aagagtaaaacagacgatatttcagatgatgaggaagctaaacaaatgggttatcatcaa
agtgatagtgaagatgagcaaaagaagcttgagattgaattgcggaacaaggctcttgaa
tccctcaaagcaaagaggggcgtgaataactaa
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