| Entry |
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| Name |
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
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| KO |
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| Organism |
gmx Glycine max (soybean)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:gmx00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
100810288
09124 Replication and repair
03420 Nucleotide excision repair
100810288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:gmx03021]
100810288
03400 DNA repair and recombination proteins [BR:gmx03400]
100810288
Enzymes [BR:gmx01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100810288
Transcription machinery [BR:gmx03021]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
100810288
DNA repair and recombination proteins [BR:gmx03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
100810288
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
15:complement(15681990..15690102)
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| AA seq |
1193 aa
MDLEEEQEYDEQMMEEDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEI
VDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSKRVVKKGHDGEEVTETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRP
PSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFS
DTLMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGV
GEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITV
GSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRV
DVNTEVGVVRDIILKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDGGWH
DLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEDAYAGTYTHCEIHPSLILGVCASI
IPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFR
QLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG
RPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRRDH
SISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQE
DMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISK
ALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQ
PAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKN
SFECRGCKNKTDIVQVYIPYACKLLFQELMAMAIAPRMLTKEVKTTNQKKKGA |
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| NT seq |
3582 nt +upstreamnt +downstreamnt
atggatttggaagaggagcaggagtacgacgagcaaatgatggaggaagacgacgacgag
gaagagatcacacaggaagacgcgtgggccgttatctccgcgtacttcgaagagaagggc
ctcgttcgccagcaactcgattccttcgacgagttcatccaaaacaccatgcaggaaatc
gtcgacgagtccgcggacatcgaaattcgacccgagtcgcagcacaatcccggtcaccaa
tccgatttcgccgaaaccatttacaaaatcagcttcggtcagatttacttgagtaagcct
atgatgacggaatctgatggtgaaaccgccacgttgttccccaaggctgctaggttaagg
aaccttacttattctgctcctttgtatgttgatgtctccaaaagggtcgtcaagaagggg
cacgacggggaagaggtcaccgagactcaggatttaaccaaagttttcattggcaaggtt
cctataatgcttcggtctagttattgcacgttgtaccagaattcggagaaggatttgact
gagcttggggagtgtccttatgatcaaggcgggtatttcattattaatgggagtgagaag
gttctgattgctcaggagaagatgagcaccaaccatgtctatgtgttcaagaagaggcag
cccaacaagtacgcctatgtggccgaagttcggtccatggcagagtcacagaacagacct
cctagtactatgttcgtgcgcatgctctctcggactagctccaaagggggttcttcagga
caatatatacgtgccactcttccttacattcgaactgaaattcccatcattattgtgttt
cgagcattgggttttgttgccgataaagatattctagagcatatatgttatgacttctca
gatactctaatgatggagctgctacgtccttccctggaagaagcgtttgtaattcaaaat
caacaggttgcacttgactacattgggaaaagaggagcaactgtaggtgtaaccaaggaa
aagagaattaagtatgctaaggagatccttcaaaaggagatgctccctcatgttggcgtt
ggagaatattgtgagaccaagaaagcctactattttggatatatcattcatcggctactg
ctgtgtgcacttgggcggagggctgaggatgatagggatcattatggaaacaagaggctg
gatctggctggtcctttacttggtggtctttttagaatgctattcagaaagctaacgaga
gatgtcaggggatatgtacagaagtgtgttgataatgggaaagatgttaatctgcaattt
gctatcaaagcaaaaaccatcacaagtggacttaaatactcacttgccactggtaattgg
gggcaagcaaatgctgcagggactagagctggtgtgtcacaggtgctgaatcgtttaact
tatgcatccactttatctcacttgcgaagattgaattccccaataggtcgtgaagggaag
ttggccaaaccaagacagctgcataattcacaatggggaatgatgtgtccagcagaaaca
cctgaaggacaagcctgtggactggtgaagaatctggcattgatggtctacataacagtt
ggttcagcagcatatcctattctggagtttttggaagaatggggcacagaaaatttcgag
gaaatctctcctgcagtaattccccaagccacaaaaatttttgtaaatggttgctggatg
gggatccatcgtgaccctgatatgttggtgagaacattgagaaagctgagacgtcgggtt
gatgtgaacactgaagttggggttgtcagagatatcattcttaaagaattgcgtatatat
acagattatggtcgttgcagtcgtcctttattcatcgtggataagcaaaggcttctcata
aagaagaaggatattcatgccttacaacagagggaatcccccgaagatggcggatggcat
gatctagtgtccaagggctttatagaatatattgacacggaagaagaagagactacaatg
atttccatgaccattaatgatcttgtacaagctaggatcaatccagaagatgcgtatgct
ggtacttacactcattgtgaaatccacccatcactgattttgggtgtatgtgcttccatc
ataccatttcctgatcacaatcagtccccacgtaatacttatcagtccgcaatgggaaag
caagcaatgggaatatatgttaccaactaccagtttcgaatggataccttggcctatgtt
ttatattatccacaaaagccactggtcactacaagagccatggagcatcttcatttccgt
caactcccagctggaattaatgccattgtagccattgcctgttactctggttataatcaa
gaagattccgtcatcatgaaccaatcgtcaatagaccgtggattctttcggtctctgttt
ttccgttcatatagagatgaagagaagaagatgggaaccctggtcaaagaagattttggc
cgtcctgatagagctaacaccatgggaatgagacatggttcttatgataagctggatgat
gatggtcttgccccaccaggcacacgagtatctggtgaggatgttatcattggaaagacc
accccaatatctcaggaggaggcacagggacaagctttacgttacacaaggcgtgatcac
agcataagcttacgtcacagtgaaactggaattgttgatcaagttttgctgaccacaaat
gctgatggattgagatttgtgaaagtaagagtgagatctgttcgtataccacagattggt
gataaattcagtagtagacatggtcagaaggggacagttggtatgacttatacacaagaa
gacatgccctggactgtggaaggcattacccctgatattattgtcaatccacatgctatt
ccttctcgaatgacaattggtcagcttattgagtgtatcatggggaaggtggcagcccac
atgggaaaagaaggagatgcaactccttttacagatgttactgtggacaatatcagtaaa
gctctacacaaatgtgggtaccaaatgcgtggttttgagactatgtacaatggtcataca
gggagacgtctaagtgcaatgattttccttggccctacatattaccaaagactgaagcat
atggttgacgacaagatccattctcgtggaaggggtcctgtgcagatcctcactaggcaa
cctgctgagggacgctcacgagatggaggtctccgatttggagagatggaacgagattgc
atgatagctcatggagctgctcacttcttaaaggaaaggttgtttgatcaaagtgatgca
tacagggtccatgtatgtgagcgttgtgggttgatagctattgcaaatctcaagaagaat
tcttttgagtgcaggggatgcaagaacaaaactgacattgttcaggtttacattccttat
gcttgtaagctcctcttccaagagttaatggctatggcaatagctccaagaatgcttaca
aaggaggtcaaaactacaaaccaaaagaagaagggagcctga |
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