KEGG   Glycine max (soybean): 100810444
Entry
100810444         CDS       T01710                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
gmx  Glycine max (soybean)
Pathway
gmx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100810444
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100810444
   03036 Chromosome and associated proteins [BR:gmx03036]
    100810444
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100810444
Chromosome and associated proteins [BR:gmx03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     100810444
    COMPASS/SET1 complex (yeast)
     100810444
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 KNTC1_N WD_LRWD1 Beta-prop_Nup120_160 PQQ_2 Beta-prop_WDR35_TULP_N Cytochrom_D1
Other DBs
NCBI-GeneID: 100810444
NCBI-ProteinID: XP_003545408
UniProt: K7M609
LinkDB
Position
14:complement(10553756..10557639)
AA seq 334 aa
MGGTQVEREEKVSLELCEEILQSMEVGMSFKDYNGRISSLDFHRASNYLVTASDDESIRL
YDVTSGTCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKDCFISGSLDRTVLLWDQRAEKCQGLLHVQGRPAISYDDQGLVFAIAF
GGYIRMFDARKYEKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTADGHIHVLDSFRGTL
LSTYIVTPISCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVASWRSATSDTGPPV
IKWAPGSLMFATGSSELSFWVPDLSKLGSYVGRK
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgggagggacacaagtggagagagaagagaaggtgtctctggaactctgtgaagaaatt
cttcagagtatggaagtgggaatgtccttcaaagactataatggtagaataagttcgttg
gattttcacagggcatccaattatctagtaactgctagtgatgatgaatccattcgtctg
tatgatgttaccagtggaacatgtttgaagacaattaatagcaagaagtatggagttgac
ctggtttgcttcacatctcatcctacaactgtcatttactcttcaaaaaatggttgggat
gaatctttgcggcttctatcgttgcatgataacaaatatttgagatatttcaaaggtcac
catgacagggttgtgtctctaagtttgtgctctcggaaagactgctttatatctggatct
ctagatcgaactgttttactgtgggatcaaagggctgagaagtgccagggacttttacat
gtacaaggaaggcctgctatatcatatgatgatcaagggcttgtctttgcaattgccttt
ggaggatacataagaatgtttgatgctcgcaagtatgaaaagggtccctttgagatattt
tctgttgggggagatatttctgatgcaaatgttgtgaaatttagtaatgatgggagactc
atgcttttaacaacagcagatgggcatattcatgtgcttgactcatttcgtggcacactt
ttatccacatatattgtcacacctatctcatgcaactccacattagaagcttcttttagc
cctgagggaatgtttgtaatatctggttctggggatggcagcatctatgcatggagtgtt
cgaagtggcaaagaagttgcaagttggaggagtgcaacttctgatactggacctcctgta
ataaagtgggctcctggaagtcttatgtttgctacaggatcatctgagttgtcattctgg
gttcctgatttgtctaaattgggatcttatgttggaagaaagtag

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