Glycine max (soybean): 100810574
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Entry
100810574 CDS
T01710
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB4 isoform X1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
gmx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100810574
09124 Replication and repair
03420 Nucleotide excision repair
100810574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100810574
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100810574
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100810574
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100810574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
100810574
NCBI-ProteinID:
XP_003523449
UniProt:
A0A0R0KLQ8
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All DBs
Position
4:50509862..50515475
Genome browser
AA seq
294 aa
AA seq
DB search
MPSAPSKLYADDVSLLVVTLDTNPFFWSTFPFPFAEFLSQVLAFLNTILLLGQLNQVIVI
ATGCNSCGYVYDSTSDKNHGSTTGTMPALYSNLLHNLDEFLARDRQLDADASHAPGIVPS
SLLSGSLSMALCYIQRAFRSGPMPPQPRILCLQGAADGPEQYVAIMNAIFSAQHSTVPID
SCYIGSNNSAFLQQASYITGGIYYKPPQLDGLYQYLSTVFATDLHSRAFLRLPKSVGVDF
RASCFCHKQTIDMGYVCSVCLSIFCEHHDKCSTCGSVFGQAQLDASAADRQRKA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgctccttccaaactctacgcagatgacgtgagcctcctcgttgtgacgcta
gacaccaaccctttcttctggagcacttttcccttccccttcgccgagttcctctctcaa
gtactcgcttttctcaacacgatcttgctcctaggccagctcaaccaggtcatcgtcatc
gccaccggatgcaactcttgcggctacgtttacgattccacttccgacaagaaccatggc
tccaccactggtacaatgcccgcgctttattccaatttacttcacaatctcgacgagttt
ctcgctagggaccggcaattagacgccgacgcctctcacgcaccgggaatcgttccttct
tcgctgttatcgggctccttgtccatggcgctttgttatatacagagagcttttcgttcg
ggaccaatgcctcctcagcctcggattttatgtttgcaaggggctgctgatggaccagaa
cagtatgtggcaatcatgaatgcaatattctctgcacagcactctacagttcctatagat
tcttgttatattggttcaaacaattctgcattcctccagcaggcttcatacataactggt
ggaatatattacaagcctccccaattggacgggctttatcaatatctttcaacagtgttt
gcaactgatttgcattctcgtgcatttttacggcttcctaaatctgtgggtgtggatttt
cgtgcctcgtgtttctgccataaacaaacaattgacatgggctatgtgtgttctgtatgc
ttatccatattctgtgagcaccatgataagtgttcaacctgtgggtctgtatttggccag
gctcaactagatgcctcagcagccgaccggcaaagaaaggcttga
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