Glycine max (soybean): 100810738
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Entry
100810738 CDS
T01710
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X2
KO
K13217
pre-mRNA-processing factor 39
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100810738
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
100810738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
UTP6_C
TPR_MalT
TPR_16
DUF5799
Motif
Other DBs
NCBI-GeneID:
100810738
NCBI-ProteinID:
XP_003553509
UniProt:
K7MYR3
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All DBs
Position
19:43337088..43346807
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AA seq
828 aa
AA seq
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MGDSEPVVTEASAAEAYASAGYAETGSNPTPEAGAAVDQSAGEAAQASSTYGYGYSNVGD
TNAYAGDPNSVLQQAHFSATGDSKPAGAAADANEASAGVGTTAAESTMVSDYNSSVNGGV
VGAVANAVGLENGNALENADGSADEKQLADGYAALSAEEDRLWNIVRANSLDFTAWTSLI
EETEKTEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSIDKVVEVYERAVQGVTY
SVDMWLHYCIFAISTYGDPNTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWACLA
VIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTADEAAAVAGVASEATGQATEGEVHP
DGAERSPKSVSAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNV
GELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGSMDLANNVL
ARATQVFVKRQPEIHLFCARFKEQTGDIDGARAAYQLVHTETSPGLLEAIIKHANMEYRL
GKMEDAFSLYEHAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILVEGLENVLL
SKPLLEALLHFEAIQPLPKRVGVDFLESWVVKFIMPNSESAGVASPTEREELSSIFLEFL
NLFGDVQSIKRAEDRHAKLFLPHRSMSELKKRHAEDFLVSDKTKVPRSYSAQSPAQSAMG
AYPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGSNYVNSQLPTSVP
QSTAYGAYPPAYPAQPAVPQQNYAQPVAAAAPAQQPSAVPQAYYGSYY
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagcgaaccggtggtcactgaagcatctgctgctgaggcatatgcttcggct
ggttatgctgagactgggtcaaatcctactcccgaggcaggtgctgctgttgatcaatcc
gctggagaagctgctcaggccagctcaacttacggatatggttattctaatgttggtgac
acgaatgcgtatgctggagatccgaattccgtcctacagcaagctcatttcagtgcaact
ggtgattccaagccagctggtgcagcggctgatgctaacgaggcctctgctggggttgga
accacagccgccgagtctactatggtttccgactacaactcgtccgtaaatggcggtgtt
gttggtgcagtggcaaatgccgtgggacttgaaaacgggaatgcgttggagaatgctgat
gggtcggctgatgagaaacagcttgcagatggttatgctgccttgtctgctgaagaagac
cgactgtggaatattgtaagagctaattctttagatttcactgcctggacttccttgatt
gaagagacagagaagacagaggacaatattttgaagattcgaagagtctatgatgctttt
ctagcagaattccccttgtgctatggttattggaagaaatatgctgaccatgaggcacgt
cttggctctatcgataaagttgttgaagtgtatgagcgtgctgttcaaggggttacatat
tcagtggacatgtggttgcattattgcatatttgctataagcacatatggggatccaaac
actgttcgtaggctttttgaacgaggattagcttatgttggaacagattatctttctttt
cccctctgggataaatacattgaatatgagtacatgcagcaggactgggcctgccttgct
gtgatctacaccagaatattagagaatccaaatcaacaattagatcggtatttcagcagc
ttcaaagagttagctggaaatcgtcctttatcagagttacgaactgctgatgaagctgct
gcagtggcaggagttgcttcagaggctactggccaagctactgagggagaagttcatcct
gatggtgcagagcgttctcctaaatctgtaagtgctggcttaacagaagcagaagagttg
gagaagtatatcgccattagagaagagatgtataagaaagctaaagagttcgattctaag
atcattggttttgaaacagctatcaggaggccctactttcatgtacggcccctcaatgtt
ggagagcttgagaattggcataactatttggactttatagaaagggaaggggacttgagc
aagattgtcaagttgtatgagagatgtgtcattgcatgcgccaattatccggagtattgg
atacgctatgttttgtgtatggaagccagcggaagcatggatcttgcaaataatgttctt
gctcgagcaacccaagtctttgttaagagacaaccagagatacatcttttttgtgctcgg
ttcaaggagcagactggagatatagatggtgctagagctgcgtatcaacttgtgcatact
gaaacttctcctggtcttcttgaagcaattatcaaacatgccaatatggaataccgactg
ggaaaaatggaagatgccttctctttgtatgaacatgccattgctattgagaaaggaaaa
gaacattcacaaacattgccgatgttgtttgctcaatattctcgatttgtatatttggct
tctgggaatgcagagaaggcaaggcagattctagttgaggggcttgagaatgttttgttg
tcaaagccactacttgaggctttattgcattttgaggctattcaacctttgccaaagcgt
gttggtgtcgactttttggagtcatgggttgtcaaattcataatgcctaactcagagagt
gctggtgtagctagtccaacagagcgtgaggaactttctagtatttttctggagttttta
aatctctttggtgatgttcaatctatcaagagagctgaagataggcatgccaaattgttt
ttgcctcacagaagcatgtcagagttgaaaaaacgtcatgctgaggatttcttagtttcg
gacaaaacaaaagtgccaagatcgtattctgctcagtcacctgcgcaatctgcgatgggt
gcatatccaaatgcgcagaaccagtggactaattatggagttcaacctcaaacttggcct
ccagttactcaagctcaagggcaacaatggactgctggctacacccagcaggcttcctac
ggggcttatgctggatatgggagcaactatgtaaattcgcaattgcctacatcagttcca
caaagtactgcatacggagcctatcctcctgcatatcctgcacagccggcggttcctcaa
caaaactatgcacaacctgttgcagcagcagcccctgcacagcaaccttctgcggttcct
caagcctattacgggagttattattga
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