Glycine max (soybean): 100811216
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Entry
100811216 CDS
T01710
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100811216
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100811216
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
100811216
NCBI-ProteinID:
XP_003548900
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Position
16:30313425..30315155
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AA seq
391 aa
AA seq
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MTYQVINYILWCFVLAVVSVTMFNPKVSSASKQSKLEGLEMNEIDQCWRLNPEWRKHRSQ
LAKCSVGYVGKMTNNIGNDLIHYKVIDPSDDPINPKNGTLRYGASRIQGKVWITFQRDMH
IRLEKPLLISSFTTIDGRGVNVHIVDNACLMIFKATNIIIHGLRIHHCRPQAPGMVMGPN
GEVIPLGQVDGDAIRLVTASKIWIDHNTLYDCQDGLLDVTRGSTNVTISNNWFREQNKVM
LLGHDDGYMRDKDMMVTVVYNYFGPNCHQRMPRIRHGYAHVANNLYMGWVQYAIGGSMEP
SLKSESNLFIAPTSGRKEVTWRKSNGIGDSWEFHSVGDVFENGASFMETQGGQVPKPNYN
PEQSFKVVDAKCVRSLTISSGVLRCSKTSIC
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcaagtaatcaattatatcctttggtgctttgttttagctgttgtgagtgtc
accatgttcaatccaaaagttagttctgccagcaaacaatccaagttagaaggcttggaa
atgaatgagatcgatcaatgttggagattgaatccagaatggaggaaacaccgttcacaa
cttgccaaatgttcagtgggctatgtagggaagatgacaaataatattggtaatgacctc
attcattacaaagttattgatcctagtgacgacccaataaaccctaaaaatggcaccttg
agatatggagcttctaggattcaaggcaaagtttggatcacattccaaagagacatgcac
atcaggctcgagaaaccccttctcattagtagcttcactactattgatggtcgaggtgtt
aatgttcacattgttgataatgcatgtttgatgatctttaaggcaaccaacataatcatc
catggccttagaattcatcactgtcgacctcaagctcctggaatggtaatgggacctaat
ggagaagtgatacctttaggtcaagttgatggagatgcaataagattggttacagcttca
aagatttggattgatcacaacacactttacgattgtcaagatggtctccttgatgtcaca
cgtggttccactaatgtgactatctcaaacaattggtttagagagcaaaataaggttatg
cttctcggacatgatgatgggtatatgagagacaaggatatgatggtcactgtcgtatat
aactattttggacctaattgccaccaacgcatgccaagaattcgccatgggtatgcacat
gttgcaaacaatctttatatgggatgggtacaatatgccataggtggtagcatggaacct
agcctcaaaagcgaatcaaacctctttatagcaccaacgtcagggcgtaaagaggtaaca
tggagaaaaagtaatggtattggagactcgtgggaattccattcggtgggggatgttttt
gaaaatggtgcatctttcatggaaacacaaggtggacaagtaccaaagccaaattataat
cctgagcaaagttttaaagttgttgatgccaaatgtgtgagatcattgactatctcatct
ggagtgttacgatgcagtaaaacctctatttgttaa
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