Glycine max (soybean): 100811385
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Entry
100811385 CDS
T01710
Name
(RefSeq) polyadenylate-binding protein 2
KO
K13126
polyadenylate-binding protein
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100811385
09123 Folding, sorting and degradation
03018 RNA degradation
100811385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100811385
03041 Spliceosome [BR:
gmx03041
]
100811385
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100811385
mRNA cycle factors
Stress granule specific factors
100811385
Spliceosome [BR:
gmx03041
]
Complex C
Other components
Complex C specific factors
100811385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
100811385
NCBI-ProteinID:
XP_003550332
UniProt:
I1MXM6
LinkDB
All DBs
Position
17:complement(39700209..39705341)
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AA seq
654 aa
AA seq
DB search
MAEIQVQHQSPVSAAPPPNGGVANAPNNANQFVTTSLYVGDLDQNVNDSQLYDLFNQVGQ
VVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRSIRIMYSHRDPSLRKS
GTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKGYGFVQFDNEEAAQNAI
DKLNGMLINDKQVYVGHFLRKQDRENALSKTKFNNVYVKNLSESTTDEELMINFGEYGTI
TSALIMRDADGKSRCFGFVNFENPDDAAKAVEGLNGKKFDDKEWYVGKAQKKSEREQELK
GRFEQSIKEAADKYPGLNLYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSG
FVAFSTPEEATRALGEMNGKMFAGKPLYVALAQRKEERRARLQAQFSQMRPVAITPSVAP
RMPLYPPGAPGLGQQFLYGQGPPAMMPPQAGFGYQQQLVPGMRPGGGPMPSFFVPMVQQG
QQGQRPVGRRGTGPVQQPQQPMPMMQQQMLPRGRVYRYPPGRNMQDVPLQVAAGGMLSVP
YDMGGLPMRDAVGQPMPIQALATALANAPPEQQRTMLGEALYPLVDQLEHDSAAKVTGML
LEMDQPEVLHLIESPDALKAKVAEAMDVLRNVAQQQTNPADQLASLSLNDNLVS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggagattcaggtgcagcatcagagtccggtgtcggcggctcctcctccaaacggc
ggcgtggcgaacgccccgaacaacgcgaaccagttcgtgacgacgtcgttgtacgttggc
gatctagaccagaatgtcaacgactcgcagctctacgatctgttcaaccaggtcggccaa
gtcgtttcggtgcgcgtctgcagggaccttactacgcgtcgttcactcggttacggctac
gttaatttcagtaaccctcaggatgcggcgagggcattggatgtgctgaatttcactcca
cttaacaacagatctattaggatcatgtattctcatcgagatcctagtcttaggaagagt
ggtactgcgaatatttttatcaagaatttggataaggctattgaccacaaggccttacat
gatactttttcttcttttggactcattctttcttgcaaaatagcaactgatgcttctggt
ctgtctaagggctatggttttgttcaatttgacaatgaagaggctgcacagaatgctatt
gacaagttaaatggcatgctgatcaatgataagcaggtctatgtaggccatttcctgcga
aagcaagatagagagaatgctctcagcaagacaaaatttaataatgtctatgtgaaaaac
ttatcagagtcaaccacggatgaagagttgatgataaattttggagaatatggtaccatt
actagtgctttaataatgagagatgctgatggtaaatcaaggtgttttggctttgtcaat
tttgaaaacccagacgatgctgccaaagctgttgagggacttaatgggaagaaatttgat
gataaggaatggtatgttggaaaagcccagaaaaaatctgagcgtgaacaagaactgaaa
ggacgatttgagcagagcataaaggaagctgctgacaaatatccaggtttgaacttgtat
ctcaagaacttggatgatacaatcagtgatgaaaaacttaaggaaatgtttgccgactat
ggtacaataacttcttgcaaggttatgcgagacccgactggaatcagcagaggatcagga
tttgttgcattttcaactcctgaggaagcaactcgagctcttggtgagatgaatggtaaa
atgtttgctggaaaacctctgtatgttgcccttgcacagagaaaagaagagagaagagca
aggttacaggcacaattttcacagatgaggcctgttgcaataacgccttctgttgcgccc
cgtatgcctctctaccctcctggtgctcctggtcttggacaacaatttttgtatgggcaa
ggacccccagccatgatgcctccacaagctggatttggttaccagcagcaactagttccg
ggaatgagacctggtggtggtcccatgccaagcttctttgttcccatggttcagcagggc
caacaagggcagcgcccagtgggccgccgaggaacaggtcctgtgcaacaaccccagcag
ccaatgccaatgatgcagcagcagatgcttccaaggggacgtgtctatcgttaccctcct
ggccgcaacatgcaagatgtcccacttcaagttgcagctggtggaatgctgtcggtccct
tatgacatgggaggtctgccaatgcgcgatgctgtgggacagccaatgcccattcaagct
ttggctacagccctcgcaaatgctccaccagaacagcagaggactatgctcggtgaagct
ttatacccacttgtggatcagctggaacatgattctgctgcaaaggttacaggcatgctt
ctggagatggaccagcctgaagttttacatctgattgagtcaccagatgctctgaaggca
aaagttgctgaagccatggatgtgttgagaaatgttgctcaacagcaaaccaacccagct
gatcaactagcctcactctctctcaatgacaatcttgtgtcttag
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