Glycine max (soybean): 100811515
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Entry
100811515 CDS
T01710
Name
(RefSeq) RNA polymerase sigma factor rpoD-like
KO
K03093
RNA polymerase sigma-I factor
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100811515
Transcription machinery [BR:
gmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
100811515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
100811515
NCBI-ProteinID:
NP_001254001
UniProt:
I0IJN9
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All DBs
Position
14:complement(38252882..38258039)
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AA seq
512 aa
AA seq
DB search
MGVVTVSTLAARTPLRLNTRLTSHQQVHKRPLIVAFKGNKLNKAALVSPQEQIPLPIETA
KKDQKRVGKTSESLKRVRAVSIVETSPCTLDMDYNEAAAKLENIYKLSPVSDTCNMEDID
SKVERVLWRRRKVGNEHDDENCDIVVRNQNKKAKRLSLDKRITLKNNAKEEVIDQTQKIR
NVKNRVQNIDVLIRDYSASTDLVSMDWKKMKIPAVLPSSEHAWLFKLMQPMKALLQAKED
LQSVGKEITDGELADATNMSIIQVRKAIEVGRAARNKLIKHNLRLVLFVISKYFQDFASG
RRFQDLCQAGVKGLITAIDRFEPKRRLQLSTYSLFWIRHSIVRSITLSSFTRVPFGLERV
RVDIQRTKLKLTFELQRSPTEEELVERIGISPERYYEVMKASKPILSLHSRHITTQEEYI
NGITDVDGVNGDNRRQLAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNL
NISREMVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttactgtttctaccttagctgctaggacgccattaagattgaatacaagg
ttgaccagtcatcagcaggtgcataaaagacctttaattgtagcttttaaaggaaataaa
ttgaataaagccgctttggtttcacctcaggagcaaattcctctacccatagaaacagca
aagaaagaccaaaaaagggtaggaaagactagtgagtctctgaagagagtgagagctgtc
tctattgttgaaacctctccatgcaccttggatatggactacaatgaagctgcagccaaa
cttgaaaatatatataaactcagccctgtatctgatacctgtaatatggaagatattgat
agtaaagtcgagagagtcttgtggaggaggaggaaggttggtaatgaacatgatgatgaa
aattgtgatattgtggttagaaaccagaataagaaggccaaacgattgagtcttgataag
aggattacattgaaaaataatgcaaaggaggaagtgattgaccaaactcagaagataaga
aatgttaagaatagagtacaaaatattgatgtgcttatcagggattattcagcatcaact
gatttagttagcatggactggaagaaaatgaagattccggcagttcttccttcttcagag
catgcatggttgttcaagttgatgcaaccaatgaaggcactcctacaagcaaaagaagat
ttacagtcagtggggaaagaaattacagatggtgaactagctgatgcaacaaacatgagc
attattcaagtaaggaaagctatagaggttggccgagctgcaagaaacaagctcataaag
cacaatctccggcttgtgttgttcgtgattagcaaatattttcaagattttgcaagtggc
cggaggtttcaagatctttgtcaggcaggagttaagggacttatcacagcaattgatcgt
tttgagccaaaaagaagacttcagctatctacatacagtttattttggataagacattct
atcgttcggtccataaccctctcaagcttcacacgtgttccttttggacttgaaagggta
agagtagatatccaaagaactaaacttaagttaacatttgagctccagaggtcaccaacg
gaagaagagttagtagaaagaattgggatctcacctgaaagatattatgaagtaatgaag
gcatcaaaacccattttatcccttcattcaagacatataaccacacaagaggagtatatt
aatgggattactgatgttgatggtgttaatggtgataataggaggcaacttgctgttcta
agacttgctcttgatgatgtgcttgattccttgaagccaaaggagagcctagtgatcaga
cagagatatggacttgatggcaagggtgacaggacattgggagaaatcgctgggaacttg
aatatttctagggaaatggttcggaagcatgaagtcaaggctctcatgaagcttaagcat
ccagcacggttggattatcttcgtcgttatgttgtataa
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