Glycine max (soybean): 100811616
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Entry
100811616 CDS
T01710
Name
(RefSeq) prolycopene isomerase, chloroplastic isoform X1
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00906
Carotenoid biosynthesis
gmx01100
Metabolic pathways
gmx01110
Biosynthesis of secondary metabolites
Module
gmx_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
100811616
Enzymes [BR:
gmx01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
100811616
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
Thi4
HI0933_like
FAD_oxidored
GDI
GIDA
FAD_binding_3
Pyr_redox_2
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
100811616
NCBI-ProteinID:
XP_003537143
UniProt:
A0A0R0HQY2
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Position
10:10950723..10957617
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AA seq
609 aa
AA seq
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MLNSSFLTVSEHTFSHTPHHFPTRASSQSPNLQPQFQSLAFANHVVSEFPSGSCSNAPRR
KGVLAVRSKSTLGVEEVVAEGGGVKGKGEEEFDAIVIGSGIGGLVAGTQLAVKGARVLVL
EKYVIPGGSSGFYQRDGYTFDVGSSVMFGFSDKGNLNLITQALEAVGCRMQVVPDPTTVY
FHLPNNLSVRVHKEYDKFTEELTSYFPHEKEGILKFYGECWKIFDALNSLELKSLEEPLY
LFGQFFQKPLECLTLAYYLPQNAGAIARKYIQDPQLLSFIDAECFIVSTVNALQTPMINA
AMVLCDRHFGGINYPLGGVGGIAKSLAKGLVDQGSEIAYKANVTSIIIEQGKAVGVRLSN
GREFFAKTIISNATRWDTFGKLLKDIPLPKEEENFQKVYVKAPSFLSIHMGVKAEVLPPD
TDCHHFVLESNWSKLEEPYGSIFLSIPTVLDSSLAPEGRHILHIFTTSSVEDWEGLSRAD
YEAKKQLVADEITSRLENKLFPGLRSSIDFMEVGTPKTHRRYLARDEGTYGPMPRRIPKG
LLGMPFNTTGIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADIGLEKKSPVLDSMLLR
LLGWLRTMA
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattcctctttcctcaccgtttctgaacacaccttttcccacactccccatcat
ttcccaacaagggcttcttctcaaagccccaaccttcagccacagtttcaatctttagcc
tttgcaaaccatgtagtgagtgaattcccatctgggtcttgctccaatgcccccagaaga
aaaggggtgttggctgtgcggtcaaagtcaacgctgggagtagaagaagtggtggcagag
ggaggaggagtgaagggtaagggtgaagaagagtttgatgcaattgttatagggtctggg
attggagggttggttgcagggacacagttagcagtgaagggtgcaagagttttggttttg
gagaagtatgtgattcctggtggaagctctggtttttaccagagagatgggtatactttt
gatgtggggtcctctgtcatgtttggtttcagtgataagggtaatctcaatttgataaca
caagcgttggaagcagttggttgtcggatgcaagtggtgcctgatccaacaaccgtttac
ttccatctaccaaataacctttctgttcgagtgcacaaagaatatgataaatttactgaa
gaattgaccagttactttccccatgaaaaggagggtattctcaaattctacggtgaatgc
tggaagatttttgatgccctgaattcgttggaattgaagtcactagaagagccactctac
ctttttggacagttttttcagaagccacttgaatgcttgacactagcctattatttgcct
caaaatgctggagccatagctcggaagtacattcaagatccacagttgttgtctttcata
gatgcagagtgttttatagtgagcacagtcaatgctttgcagacaccaatgatcaatgct
gccatggttctatgtgacagacactttggtgggattaactaccctcttgggggtgttggt
gggattgcaaagtccttagcaaaaggtctcgttgatcagggtagtgagatagcttacaaa
gcaaatgtcaccagtattataattgagcagggcaaagctgttggtgtgaggctttcaaat
ggcagagagttctttgccaaaaccataatatcaaatgctaccagatgggatacatttgga
aagttactgaaggacattccacttccgaaagaagaagagaacttccagaaagtttatgtt
aaagctccatcttttctttcaattcacatgggggttaaagcagaggttttaccaccagat
acagactgtcaccatttcgtgcttgagagcaactggtccaaattggaggagccatatgga
agtatctttctaagtataccaactgttcttgattcatcattggctcctgaaggccgtcat
atccttcatatattcacaacttcttctgtggaggactgggagggtctttcaagagcagac
tacgaggcaaagaagcagcttgtagcagatgaaatcacaagcagattagagaataaattg
tttccaggtcttagatcatccattgattttatggaggtagggaccccaaagacacaccgg
cgatacctggctcgtgacgagggaacttatggtccgatgccgcgcagaatcccaaaaggg
ttattgggaatgccattcaataccacaggcatagatggtctttactgtgttggtgatagc
tgcttccctggacaaggtgttattgctgtagctttctcaggagttatgtgtgctcatcga
gtagctgctgatattgggctggagaagaagtcacctgtgttggattccatgctgcttcgg
ttgcttggttggttaagaacaatggcatga
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