Glycine max (soybean): 100811631
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Entry
100811631 CDS
T01710
Name
(RefSeq) endoribonuclease Dicer homolog 1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100811631
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100811631
microRNA pathway
RISC loading complex
100811631
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DND1_DSRM
DEAD
dsrm
ResIII
Dicer_PBD
Dicer_dsRBD
SNF2-rel_dom
SWI2_SNF2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100811631
NCBI-ProteinID:
XP_006604922
UniProt:
K7N0F5
LinkDB
All DBs
Position
19:complement(50948535..50961153)
Genome browser
AA seq
1945 aa
AA seq
DB search
MEDGSRVPAGDDPSYWLDACEDISCDDFIDFDVSSIVVSDQPDNPSNQDFFGGIDKILDS
IKNGAGLPLNHAAAEPPSNVTAAASGGAEVCLPSNATPEDSFDHSGGAALSNGSSKQSNG
NETGVLVDYSQERGTPTLNGGLDFDGEERCSKRARLGGYNNDRPYHGRGNYQGKERERCF
SNNRKRPRGGRDEIDRRDKDGGGRKREHCGAVGRRDVRDRDWRDRETRGYWERDKSGSTD
MVFRTGAWEPDCNREDKMAIDMKLEKNGNLDKKSEEAKERVPEEKARQYQLDVLEQAKRK
NTIAFLETGAGKTLIAVLLIKSIQESLHKQNKKMLAVFLVPKVPLVYQQAEVIRERTGYQ
VGHYCGEMGQDFWDARRWQREFDTKHVLVMTAQILLNILRHSIIKMEAINLLILDECHHA
VKKHPYSLVMSEFYHTTPKENRPSVFGMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVC
TIKDRKELEKHVPMPSEVVVEYDKAASLCYLHEQIKQMEVEVEEAAKCSSRRSKWQFMGA
RDAGAKEELRQVYGVSERTESDGAANLIQKLRAVNYALGELGQWCAYKVAQSFLAALQND
ERANYQLDVKFQETYLSKVVSLLKCQLSEGAVSDKNAGIDDSENGAVQSGSEHEEMEEGE
LPDSHVVSGGEHVDVIIGAAVADGKVTPKVQALIKILLKYQHTEDFRAIIFVERVVSALV
LPKVFAELPSLSFVKCASLIGHNNSQEMRTYQMQDTIAKFRDGRVTLLVATSVAEEGLDI
RQCNVVIRFDLAKTVLAYIQSRGRARKPGSDYILMVERDNLSHEAFLRNARNSEETLRKE
AIERTDLSHLKDTSRLISVDTRPGTVYQVKSTGAVVSLNSAVGLIHFYCSQLPSDRYSIL
RPEFIMERHEKPGGPTEYSCKLQLPCNAPFENLEGPICSSMRLAQQAVCLAACKKLHEMG
AFTDMLLPDKGSGGEKEKDEQTDEGDPLPGTARHREFYPEGVADILKGEWILSGKDACNN
SKLLHLYMYAVKCENLGHSKDPFLTQVSNFAVLFGNELDAEVLSMSMDLFIARTVTTKSS
LVFRGLISITESQLASLKSFHVRLMSIVLDVDVEPSTTPWDPAKAYLFVPMVGDKSVDPT
NQIDWHLVETIIGADAWKNPLQKARPDVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSH
PTYGIRGAVAQFDVVKASGLVPNRDAMQTQKHINMTTNGKLMMADTCTNAEDLIGKIVTA
AHSGKRFYVDSIRYDMSAENSFPRKEGYLGPLEYSSYADYYKQKYGVDLIYRQQPLIRGR
GVSYCKNLLSPRFEHSEAHEGESEETHDKTYYVFLPPELCLVHPLPGSLVRGAQRLPSIM
RRVESMLLAVQLKNMINYPVQASKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLF
LKYPQKHEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQADRFAPSRWAAPGVLPVFDEDT
KDGESSLFDQERSISKIERMDCHTDGYEDEMEDGELESDSSSYRVLSSKTLADVVEALIG
VYYVEGGKNAANHLMKWMGIQIEFDPDTMDCTRKPFNVPDSILRSVDFDALEGALNMKFK
DRGLLVESITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAA
VNNENFARVAVKHNLHVHLRHGSSALEKQIKEFVKEVQDELSKPGFNSFGLGDCKAPKVL
GDILESIAGAIFLDSGRDTTVVWKVFQPLLHPMVTPETLPMHPVRELQERCQQQAEGLEY
KASRIGNLATVEVFIDGVQVGAAQNPQKKMAQKLAARNALAALKEKEVGKTQEKNDDNGK
KNGNQTFTRQTLNDICLRRNWPMPFYRCVNEGGPAHAKRFTFAVRVNTTDKGWTDECVGE
PMPSVKKAKDSAAVLLLELLNKLYS
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgggagtagggttccggcgggggatgacccgtcttactggctggatgcgtgt
gaggacatatcgtgtgatgatttcattgattttgatgtctcttccatcgtcgtctctgac
cagcctgacaacccttccaatcaggacttcttcggtggcattgataagattttggacagc
atcaagaacggtgctggtctccctctcaatcatgctgctgctgaaccacccagtaatgtc
actgcagcagcatcaggaggagcagaagtgtgcttgccttccaatgccactccggaggat
tcttttgaccattctggtggcgctgctctgagtaacggctccagtaagcagtctaatggg
aacgaaacgggagttttggttgattattctcaggaaagggggacacccactctgaatgga
ggccttgattttgatggtgaagaaaggtgcagcaaaagggctcggcttggtggctacaat
aatgatcggccttatcatggtagagggaattatcaaggcaaggagagggagaggtgtttt
agtaataacaggaagaggccgcgggggggtagggatgaaattgataggagggataaggat
ggtggtggaaggaaaagagaacattgtggtgctgttggcaggagggatgttagagatagg
gattggagggatagagaaactaggggttactgggagagggataagtctggttccactgat
atggtctttcgcacgggtgcttgggaacctgattgtaatcgagaagacaaaatggcgatt
gacatgaaactggagaaaaatggaaaccttgataagaagtccgaggaggctaaggagagg
gttcctgaggaaaaagctagacagtatcagttggatgttcttgagcaggcaaagaggaaa
aatactatagcttttcttgaaactggagcagggaaaaccttaattgctgttcttctcatt
aaaagtatacaggagagtttgcataagcaaaataagaaaatgcttgcagtatttttagtt
ccaaaagttccacttgtttaccagcaagccgaagtaattcgtgagcggactggttatcaa
gtaggccactattgtggagaaatggggcaggatttttgggatgctcgaaggtggcagcgt
gaatttgacaccaaacatgttttagtcatgactgctcaaattcttttgaacattttgagg
catagcataataaaaatggaagcaatcaatctcttgattctggatgagtgccaccatgct
gtgaaaaaacacccatattcactggtgatgtctgagttctaccatacaacacccaaagag
aacaggccatctgtatttggaatgactgcttctcctgttaacttgaagggtgtctccagc
caagtagattgtgcaataaaaattcgtaatcttgaaagtaagctagattctatagtttgc
accattaaagatcgtaaggagctggagaaacatgtaccgatgccctctgaagttgtggtg
gagtatgataaagctgccagtttatgttatctacacgagcagataaagcagatggaggtt
gaagttgaagaagctgcaaaatgtagttcaagaagaagcaaatggcagtttatgggagct
agagatgctggagctaaggaagagctgcgccaagtatatggtgtttctgaaagaacagaa
agcgatggagctgcaaacctaattcagaagttgagagctgttaattatgcacttggtgaa
ctgggacaatggtgtgcatataaggttgcacaatcctttttagcagctttgcaaaatgat
gaaagggccaactaccagcttgatgtcaagtttcaggaaacttatctgagtaaagttgtt
tcacttctgaaatgccaactgtcggagggtgcagtttctgacaaaaatgctggtattgat
gactcagagaatggtgcagttcaaagtggctctgaacatgaagagatggaagaaggagag
cttccagacagtcatgttgtctctggcggggagcatgtggatgttattataggagctgct
gtggctgatggcaaggtgacccccaaggtgcaggcactaatcaaaatacttctcaagtat
cagcatacagaagatttccgtgcaatcatctttgttgaacgtgttgtgtctgcattagtt
ctgcccaaggtctttgcagagcttccatcacttagttttgtgaagtgtgcaagtttgatt
ggtcacaataacagtcaggaaatgcggacctaccaaatgcaggatacaattgccaaattc
cgtgatgggcgggtcacattgttggttgccactagtgttgctgaagaaggacttgatatc
cgtcaatgcaatgtcgttattcgctttgaccttgcaaagactgttctggcatacatacaa
tccaggggacgtgctagaaagcctggatctgattacatcctgatggttgagagggacaat
ttatcacatgaagcattcctaaggaatgccaggaacagtgaggaaactttgcgcaaagaa
gcaatagagagaacagaccttagtcatctgaaggacacttcaaggttgatctctgttgac
acccggcctggaacagtttaccaggtgaagtcaactggggcagttgtgagcctaaattct
gctgtaggtcttatccacttctactgctctcagctacctagtgacagatattcaattctt
cgccctgaatttattatggagaggcacgaaaaacctggaggtcccacagaatattcttgc
aagcttcaactaccatgtaatgcaccctttgaaaatcttgagggtccaatatgcagttct
atgcgtctggcacaacaggctgtttgtctggctgcttgcaagaaactgcatgagatgggt
gcattcactgacatgctattgcctgataaaggaagtgggggagaaaaagaaaaggatgaa
caaactgatgaaggagatccacttccagggactgctagacatagggagttctaccctgaa
ggtgtggctgacatactgaagggagaatggatcttatctggaaaagatgcttgcaacaac
tccaaattgcttcatctttatatgtatgctgtgaagtgtgaaaatctaggccattcaaag
gatccgttcttgactcaagtttcaaattttgcagtactttttggcaatgagctggatgca
gaggtgttatcgatgtcaatggatctatttatcgctcgaactgtgactacaaagtcatct
cttgtctttagggggttgataagtatcactgagagtcagctggcatccctgaaaagcttt
catgtaagattaatgagcattgtcttggatgtggatgttgaaccatctaccactccttgg
gatcctgcaaaggcatatttgtttgtcccaatggttggcgataagtctgtagatcctacg
aaccaaattgactggcatctggttgagacaataattggagctgatgcatggaagaatccc
ctccagaaagctcgaccagatgtttaccttggtactaatgagagaacattaggtggagac
agaagggaatatggatttgggaaattgcgtcatggcatggcttttgggcaaaaatcacat
cctacctatggaatcagaggagctgtggcccaatttgatgtggtgaaagcttcaggattg
gttcctaacagagatgccatgcaaacacaaaagcacatcaatatgactaccaatggaaaa
ttaatgatggcggatacctgtactaatgcagaggatctgattgggaaaattgtaactgct
gctcattcagggaagaggttttatgttgattcaatacgctatgacatgtcagcagagaac
tctttccctaggaaagaaggttatcttggtcctctggagtacagttcatatgctgattac
tacaagcaaaagtatggggttgatttgatttacaggcagcaacctcttataagagggcgt
ggtgtatcatactgcaagaatcttctgtcccctcgatttgagcacagtgaagctcatgaa
ggtgaatccgaagagacacatgacaaaacttattatgtttttcttcctcctgagctatgc
cttgtacacccattgcctggatcacttgtccgtggtgcccagaggttgccttcaataatg
aggagggttgaaagtatgctacttgcagttcaacttaagaatatgataaattatcctgtc
caggcttcaaagatcttggaagccttgactgccgcctcttgccaggagacattctgctat
gaaagggcagagcttcttggagatgcttacctgaaatgggttgttagtcgatttcttttc
ctaaaatatccacagaaacatgaaggtcaacttactaggatgagacaacaaatggtcagt
aacatggtattatatcagtatgcattaagtaaagggcttcaatcatatattcaagcagat
cgttttgctccatccagatgggcagctcctggggtgctgcctgtctttgatgaggatacc
aaggatggggagtcatctttgtttgaccaggagcgatccatttccaagatcgagaggatg
gattgtcacacggatggatatgaggatgagatggaagatggtgagcttgagagtgattca
agttcttacagagttctatccagtaagacacttgcagatgttgtggaagcactaattggg
gtatattatgtagaaggtggtaagaatgctgccaaccaccttatgaaatggatgggcatt
caaatagagtttgatcctgatacaatggattgtacaagaaagccatttaatgttccagat
agcatacttaggagtgttgattttgatgctttagaaggtgctttaaatatgaagtttaaa
gacaggggactgctggtagaatccataactcatgcctccaggccatcttcaggagtatcc
tgttatcagcggttggagtttgttggtgatgctgtcttggatcatcttattaccaggcac
ttgtttttcacttacacaaatctgccaccgggacgtctgactgaccttcgggctgctgct
gtaaacaatgaaaattttgcgcgtgttgcagttaaacacaaccttcatgtgcatctccgg
catggatccagtgccctagaaaaacagattaaagaatttgttaaggaagttcaagatgaa
ttgtcaaagccaggttttaattcctttggtctgggagactgcaaagcccccaaggtcctt
ggtgacattcttgaatctattgcaggtgccatttttcttgacagtgggagggatactact
gttgtttggaaggtttttcagcctcttttgcatcctatggttacccctgagactctgcca
atgcatcctgtgcgtgagctgcaagagcggtgccagcagcaagctgaaggcttagagtat
aaagcaagtcgtattggcaatttggccactgttgaagtattcattgatggggtgcaagta
ggggctgctcaaaatccacagaaaaaaatggcgcagaaattagctgcaagaaatgccctt
gctgctttgaaagagaaggaggtgggaaaaactcaggaaaagaatgatgacaatgggaag
aagaatggaaaccaaacatttactaggcaaacattaaatgatatctgtttacgaagaaat
tggcctatgccattttacaggtgtgtgaatgagggtggtccagcacatgcaaagaggttt
acatttgcagtgcgtgtcaatactactgataaaggatggacagatgaatgtgttggagag
ccaatgccaagtgtcaagaaggccaaagactcagctgctgttcttctcttagaactactg
aacaaattatactcgtga
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