Entry |
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Name |
(RefSeq) vacuolar protein sorting-associated protein 35A
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KO |
K18468 | vacuolar protein sorting-associated protein 35 |
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Organism |
gmx Glycine max (soybean)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:gmx00001]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100811902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:gmx04131]
100811902
Membrane trafficking [BR:gmx04131]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
100811902
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
1:51280310..51289404
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AA seq |
794 aa
MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVL
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDAVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQPSVDIKTVLSQLME
RLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHP
DRLDYADQVLGACVKKLSGKGKIEDNKATKQIVALLTAPLEKYNDIMTALKLSNYPRVME
YLDIPTTKVMATVIIQSIMKNGTRISTSEKVEALFELIKGLIKDSDGIPNNELDEDDFKE
EQNSLARLILMLYNDDPEEMFKIIDTVRKHILNGGPKRLPFTVPPLVFSSLKLVRQLQGQ
EENPFGDDASTTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCELEPVAYEFF
TQAYILYEEEISDSRAQITAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILN
KYLYFFEKGNLQVTVAAIQGLIELIMNEMQSDTTTQDPAANAFLASTMRYIEFQKQKGGA
VGEKYEAIKVSHAG |
NT seq |
2385 nt +upstreamnt +downstreamnt
atgatgttggacggaaccgaagacgaagagaagtttctcgccgccggaatcgccggcctt
cagcagaattccttctacatgcaccgtgcattggactcgaacaatctcagggacgctttg
aagtattcggctcagatgctctccgagctcaggacttccaagctttcgcctcacaagtac
tacgaactatacatgcgcgcctttgatcagttaaggaagctggagatgttcttcgaggaa
gagactcgtcgcggttgctccattattgatctttatgaactcgtccagcacgccggcaac
attttgccccgattgtatctcctctgtacagtaggatcagtatacatcaaatccaaggaa
gctcctgcaaaggatgttcttaaggatctcgtggagatgtgtcgaggcattcagcaccct
gttcgtggactctttctcagaagttacctttctcaagttagtagggataaattgccagat
attggttcagagtacgaaggggatgcggatactgtagcagatgctgtagagttcgtgctc
caaaatttcactgaaatgaacaaactttgggtgcgaatgcaacatcaggggcctgcccgg
gagaaggagaaacgggaaaaggaaaggagcgagttgcgtgatcttgttggaaagaatctt
catgttctcagtcagatagagggtgttgacctagatatgtacaaagatgctgtgcttccc
agagtactggagcaggttgtgaattgcaaagatgagttggctcagttttacttgatggat
tgtataattcaagtcttccccgatgagtatcacttgcaaactcttgatgtgttgttgggt
gcttaccctcaacttcagccatctgtggacatcaagacagtactgtcccagttaatggaa
aggctttcgaattatgctgcttcaagtgcagaggtgttgccagagtttttacaagtggaa
gcattttccaaattaagcaatgcgattggcaaggtgatagaggcacagcctgacatgccc
actgttggagttgtaactttatattcgtcccttctcaccttcactcttcatgttcaccct
gatcgacttgattatgcagatcaagttttgggagcatgtgtgaaaaaactctctggcaag
ggaaaaattgaggacaacaaggcaactaagcagattgttgctctattaactgctccacta
gagaaatataatgatattatgactgcattgaagctttcaaattatcctcgcgtaatggaa
taccttgacattccaactactaaggtcatggcaactgttattattcaaagcattatgaaa
aacggaacacgcatttctacttcagaaaaggttgaagcattgtttgaactgataaagggg
cttatcaaggattctgatggaatccctaataatgagctggatgaagatgatttcaaagag
gagcagaattctcttgcccgcctaattctgatgctttataatgatgatccagaagaaatg
tttaagatcattgatactgtgaggaagcacatattgaacgggggaccaaaacgcctgcct
ttcactgttccacctcttgttttttcttctttaaagttggtcagacagttgcaaggtcaa
gaagaaaatccttttggagatgatgcatcaacaacaccaaagaaaatttttcagctttta
aatcagaccatcgagactttgtcaggtgtcctggcaccagaattagcattgcagttgtac
ttgcaatgtgctgaggctgcaaatgactgtgaattggaacctgttgcttatgaatttttc
acccaagcttatattctatatgaagaagaaatttctgattccagagcacagatcacagct
atccatttaataatagggactcttcaaaggatgcacgtctttggtgttgaaaacagggat
actttaactcacaaggccacagggtattcagcaaagcttttaaagaagccagatcaatgc
agagctgtgtatgcatgctcacatctgttttgggttgatgatcatgataacatgaaagat
ggagagagggtcctattatgtcttaagcgggctttaagaattgcaaatgctgcccaacaa
atggcaaatgcagcacgaggtagcactggatcagtaatgctcttcattgagatattgaat
aagtatctttacttctttgagaagggaaacctacaagtcaccgttgctgctatccagggc
ttaattgagttaattatgaatgagatgcagagtgataccacaactcaagatccagctgct
aatgctttcttagccagtaccatgcgctatatagagttccagaaacaaaaagggggtgcg
gtaggcgagaagtatgaagccatcaaggtttcacatgctggatga |