Glycine max (soybean): 100811995
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Entry
100811995 CDS
T01710
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100811995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100811995
03110 Chaperones and folding catalysts [BR:
gmx03110
]
100811995
03029 Mitochondrial biogenesis [BR:
gmx03029
]
100811995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100811995
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100811995
Messenger RNA biogenesis [BR:
gmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100811995
Chaperones and folding catalysts [BR:
gmx03110
]
Heat shock proteins
HSP60 / Chaperonin
100811995
Mitochondrial biogenesis [BR:
gmx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100811995
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100811995
Exosomal proteins of other body fluids (saliva and urine)
100811995
Exosomal proteins of breast cancer cells
100811995
Exosomal proteins of colorectal cancer cells
100811995
Exosomal proteins of bladder cancer cells
100811995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
100811995
NCBI-ProteinID:
XP_003555721
UniProt:
A0A0R4J656
LinkDB
All DBs
Position
20:complement(29409789..29414727)
Genome browser
AA seq
575 aa
AA seq
DB search
MYRLASNLASKARIARSSSQQIGSRLSLSRNYAAKDIKFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSIAAGMNAMDLRRGISMAVDAVVTNLKSRARMISTSEEIAQVGM
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNDK
NQKCELEDPLILIHEKKISSINAIVKVLELALKRQRPLLIIAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKAGLQDLAVLTGGALITEELGLKLEKVDLDMLGTCKKITVSKDD
TVILDGAGDKKALEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASRELDKLQTANFGQKIGVQIIQNALKT
PVLTIASNAGVEGAVVVGKLLEQENHDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVSELPNDNKDTPAMAGGMGGMGY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcttggcttctaacctcgcttccaaagcaaggattgctaggagtagcagccaa
cagattggaagtaggctgagtttgagcagaaactatgcggctaaagacattaaatttggt
gtggaggctcgggctctgatgcttaagggtgttgaagagcttgctgatgctgtcaaagta
accatgggtcccaagggccgtaatgttgtgattgagcaaagttttggtgcccctaaagta
accaaagatggagtaactgttgcaaagagcattgaattcaaggataaagttaagaatgtt
ggtgccagtcttgtaaagcaggttgctaatgctactaatgatgtggctggtgatggaacc
acatgtgctacagtccttacacgagcaatatttactgaaggctgcaaatcaatcgcggct
ggaatgaatgcaatggacctgaggcggggtataagtatggctgtcgatgctgtggtcaca
aatttgaaaagcagagctaggatgattagcacatctgaagaaatagcgcaggttgggatg
atatctgctaatggagagagagaaattggtgagttgattgcaaaagctatggagaaagtt
ggcaaagagggagtaatcacaatttcagatggcaaaacattatataatgagttggaagtt
gttgaaggaatgaagctcgacaggggctacatatctccttatttcattacaaacgataag
aaccagaaatgtgaacttgaagatccccttattctaattcatgagaagaaaatctctagt
ataaatgctatagttaaagtcttagagttggctttgaagagacaaagacctttattgatt
attgccgaggatgtggaaagtgatgcacttgcaactcttattctaaataagcttcgggcc
ggaattaaggtgtgtgctattaaagcccctggttttggtgaaaataggaaggctggtctt
caagatcttgcagttctcacaggaggagcacttattactgaagagcttggcttgaagctt
gaaaaagtggatttggatatgcttggtacctgtaaaaaaataacagtttctaaggatgac
actgtcattcttgatggagcgggtgacaagaaagcacttgaggaaagatgcgagcagatt
aggtcagcaattgaaaacagtacctcagattatgacaaggaaaagttacaggaaagatta
gccaagctttctggtggtgttgcagtgcttaagattggaggagccagtgaagctgaagtt
ggtgagaagaaggatagagtgactgatgcattaaatgcaactaaggctgctgtagaggag
ggcatagtgcctggtggtggtgttgctcttctatatgcatcgagagagttggataaactt
caaactgctaacttcggtcaaaagattggtgtccagattatccaaaatgctttaaagaca
cctgtgctcactattgcatcaaatgcgggagttgagggtgcagttgttgttggcaaacta
ttggagcaggagaatcatgatctaggatatgatgcagccaaaggtgaatatgttgatatg
gttaaagctggaatcatagaccccttgaaggtgattaggacagccttggttgatgcagcc
agtgtatcgtctttgatgacaacaactgaagctgttgtgtctgaacttccaaacgataat
aaagatactccagctatggctggtggcatgggtggcatgggttattga
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