Glycine max (soybean): 100812232
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Entry
100812232 CDS
T01710
Name
(RefSeq) exosome complex component RRP43 isoform X2
KO
K12586
exosome complex component RRP43
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100812232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100812232
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100812232
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100812232
NCBI-ProteinID:
XP_003544676
UniProt:
I1MA05
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Position
14:26464975..26475506
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AA seq
299 aa
AA seq
DB search
MGLSNASEDLSSEMEVDAFRRLFPLRYFERHLAESIRPDGRPLGKARETSIFLGAVASAN
GSALVKIGSTTMLTAIKMEVMTPSLESPDEGCLAIDFHMPPICSPIVRPGRPAEASPVVS
KQLSDTISSSRMIDLKELSLVGGKAAWMAYLDIYCLDADGALFDAALISAVAALSHLQIP
AVAMNDDGKIVLVSGEDGQKPVNKEKRKLTLRSIPFSLTCILHKNYILADPTAEEESIME
THVTIVLDTSGQLISLYKPGGPALAYTSAIQDCVGLTGQRVKELKSYLDKENSAMEVVV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgggattgtcgaatgcttctgaggatttgtcatcagagatggaggttgatgcctttaga
cgcctttttccacttcgatattttgagcgtcatcttgctgaatctataaggccagatggt
agaccacttggaaaagctagagaaacaagtatttttcttggtgctgttgcgtctgctaat
gggtcggctcttgtgaagattggatcaactactatgttgactgctattaaaatggaagtc
atgactccctccttggagtctccagatgagggctgtctagctattgatttccacatgcct
ccaatttgttctccgattgttaggcctggcaggcctgctgaagcatcaccggtggtatca
aagcagttgtctgacaccatttcaagttctagaatgattgatttgaaagaattgtccttg
gttggtggaaaagctgcatggatggcttacctggatatctattgtttggatgctgatggt
gctctttttgatgctgcattaatttctgcagttgctgccttatctcatttgcaaattcct
gctgttgccatgaatgatgatggcaaaatagtactcgtgtctggcgaagatggacaaaag
ccagtcaataaggagaagaggaagcttacattaagaagcattccattctcattaacatgc
atacttcacaagaattacatcttggcagatcctactgctgaagaagaatctattatggaa
acccatgtgacaatagttttggatacatccggtcaactaatatctctttacaagcctggt
gggccagctcttgcctatacttctgctatccaggattgtgtcgggctaacggggcaaaga
gtaaaggaactaaagagctacttagacaaagaaaattctgctatggaggtggtggtttga
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