Glycine max (soybean): 100812247
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Entry
100812247 CDS
T01710
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100812247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100812247
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100812247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
100812247
NCBI-ProteinID:
XP_014623439
UniProt:
I1MFM9
LinkDB
All DBs
Position
15:complement(8968866..8974460)
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AA seq
539 aa
AA seq
DB search
MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAEKRAKCFDCGATLTRLIREYN
VRASSTNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL
EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDKESNTGGVRIRKKTGEDDEGHVSDKGE
EDEEEESERKSRLGLNKRAGDDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGGGLSKSGKELKKLLGKASGLNESDAEDD
DDDDDDVEDDVGVPPAIATKQKDALKEEPVDNSPSKPTATGPARGTPSSKSSKGKRKLNE
EAKPSNTAPPKKVKVENEPKVSTKDGNGSASKNSAPPKGTPPLSSKAGSSTTTSGPVSEE
EIRAVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTSGASYVILRDK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggacctgcaattgaagtcgagttgtagcggatgcggatcaacgacggatctc
tacggaagcaattgcaagcacatgactctgtgcttgagctgcggcaaaaccatggcggag
aaacgcgccaaatgcttcgattgtggggccaccctcactcgcctcattcgagaatataat
gttcgtgcaagttctaccaatgataagaattacttcattggaaggttcataaacggtttg
cctgatttttcgaagaagaaaagtgctgagaacaagtggtctctgcagaaggatggactg
cacggacgccaaattactgatactctgcgggagaagtacaagaacaagccttggctcttg
gaggacgaaacgggtcagtcccagttccagggtcatctagaaggttcccaatcggctaca
tattacctgctaatgaaggaaaggaaggagtttgttgccattcctgctggttcttggtac
aactttaacaaggtagctcaatataagcaattgacattggaggaagcagaagagaagatg
aagaatagaaagaaaactgcagatggatatcaaagatggatgatgaaagcagcaaataat
ggcccagctgcatttggtgaacatgggaaatttgatgacaaggaaagcaacacaggtgga
gtgagaatccgtaaaaaaactggtgaggatgatgaaggtcatgtctctgataagggagag
gaggatgaagaggaggaatcagaaaggaagagtagacttggactaaataaaagagctggt
gatgatgatgaagaaggtccaaggggaggggaccatgatctagatgacgacgatgttgag
aagggtgatgattgggagcatgaagagattttcactgatgatgatgaagctgttggcaat
gatcccgaggaaagggaggatttggctcctgaagttcctgctcctcctgaaatcaagcag
gatgaggaagaagaggatgaagataatgaagaggggggaggtctgagtaaatctgggaaa
gaactgaagaagctgcttggaaaagctagtggtctgaatgaatctgatgcagaggatgac
gatgatgatgacgatgatgtggaggatgatgttggtgttcctcctgccattgctacgaag
caaaaggatgctcttaaggaagaacccgttgacaacagcccttcaaagccaacagcaaca
ggacctgctcgtggaacaccttcttcaaagtcttcaaaggggaagagaaaattaaatgaa
gaagcaaagccatctaatactgcacctccaaagaaggtgaaggtagaaaatgaaccaaaa
gtgtccaccaaagatggaaatgggtctgcatctaaaaatagtgcacctccaaaaggtaca
cctccattgtcatcaaaggccgggtcttccacaaccacttctggacctgtgagtgaggaa
gaaattagggctgttttaaggcagaagactccggtgaccactcaggatcttgtagctaaa
tttaaggcaagactaagatgttcagaggataagcaagcatttgctgagatccttaagaga
atctctaagatacagaagactacaagtggagccagttatgttatcctgagagataagtga
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