Glycine max (soybean): 100812405
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Entry
100812405 CDS
T01710
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100812405
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100812405
REST complex
100812405
Heterochromatin formation proteins
Other heterochromatin formation proteins
100812405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
100812405
NCBI-ProteinID:
XP_003543838
UniProt:
A0A368UL26
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All DBs
Position
13:15824446..15834647
Genome browser
AA seq
1371 aa
AA seq
DB search
MKRARDDMYPASQFKRPFASSRADSYGQNQVPGSGGGGGGGNGGVVGGGANTSQKLTTND
ALSYLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTAGVIKRVKELFKGHNNLIFGFNTF
LPKGYEITLDEDEAPPKKTVEFEEAISFVNKIKKRFQNDELVYKSFLDILNMYRKEHKDI
GEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPYIRNSLHRFNERGSMAPMIRQM
PADKQRYRRDRLPSHDRDHDMSAERPELDDDKTMMNIHKEQRKRESRERRMRDQDEREHD
LDNNRDLNLQRFPDKKKSVKKAEGMYSQAFSFCEKVKEKLSSSDDYQTFLKCLHIFSNGI
IKRNDLQNLVTDLLGKHSDLMDEFNDFLERCENIDGFLAGVMSKKSLSTDAHLSRSSKLE
DKDKEHKRDMDGAKEKERYREKYMGKSIQELDLSDCKRCTPSYRLLPADYPIPTASQRSE
LGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRYELDMLLESVSSAAKKAEE
LYNNINENKIGMETLNRIEDHFTVLNLRCIERLYGDHGLDVIDILRKNPTHALPVILTRL
KQKQEEWSKCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQDSKNLSTKSLVTEIKEIKEK
QQKEDDIIQSIAAGNKQPLIPHLEFEYSDVGIHEDLYKLVCYSCEELFSSKELLNKIMRL
WSTFLEPMLGVPSQSHGTERAEDRKTGHNVRNFGAPNIGGDGSPRGDSLLMNSRVPKSDK
NEADGRVTEVKNVHRTTVASNDKENGSVGGELVSRDDPLMDKGQKNVEYNDKASGFSKQF
TSDEQGAKNNVSIAIRGENSLNRTNLDVSPGRALTPSRPTDVDDSVSKSQGVNAPSVEGC
DMATPVPVANGVLSESSKVKTHDESVGPCKIEKEEGELSPNGDSEEDNIVAYGDSNVQSM
AKSKHNIERRKYQSRNGEDESCPEAGGDNDADADDEDSENVSEAGEDVSGSESAGDECFR
EDHEEEEDIEHDDVDGKAESEGEAEGICDAQAGGDGTSLPLSERFLSSVKPLTKHVSAVS
FVEEMKDSRVFYGNDDFYVFFRLHQALYERLLSAKTHSMSAEMKWKAKDASSPDPYSRFI
NALYNLLDGSAENAKFEDECRAIIGNQSYVLFTLDKLIYKLVRQLQTVATDEVDNKLLQL
YEYEKSRKPGKLNDSVYHANAHVILHEENIYRLQCSSTPSRLSIQLMDNMNEKPELFAVS
IDPNFSFYLHNDFLSVFPNKKEPHGIILHRNKRQYGKLDELSAICSAMEGVKVINGLECK
IACSSSKISYVLDTQDFFFRPRKKRRTPSGTTTSRFRRDREERFRKLLACS
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgaagagggcaagggatgatatgtatcctgcctctcaattcaaacgcccctttgcttca
tcacgtgctgattcctatggacaaaaccaagtccctggaagcggagggggaggaggaggt
ggcaatggaggtgttgttggcgggggagcaaatacttcccaaaagcttactaccaatgat
gctttatcctatttgaaggaagttaaagacatgtttcaggaccaaagagagaagtacgac
atgttccttgaggtcatgaaagatttcaaggcccaacggactgacactgccggtgtcata
aaaagggtgaaggagttattcaaagggcacaacaatttgatttttggatttaatacattc
ctgccaaaaggttatgagataacgcttgatgaggatgaggctcctccaaagaaaactgtt
gaatttgaagaagcaatcagctttgtgaacaagataaagaaacgattccaaaatgatgag
cttgtttacaaatcattcttggacattttaaatatgtaccgcaaagagcataaggacatt
ggtgaggtttatagtgaggttgctaccctttttaaggaccatcgagatttgctcgaggag
ttcactagattcttaccagatacttctgctgcaccttccacacagcatgctccatatatt
cgaaattcattgcatcgcttcaatgagcggggttctatggcccctatgatccgccaaatg
ccagctgacaagcaacgttatcgacgagacaggcttccttctcacgatcgtgatcatgat
atgagtgctgaacgccctgagctggatgatgacaagacaatgatgaacatacacaaggag
cagaggaagcgtgaaagtagggagaggagaatgcgtgatcaagatgagagagaacatgat
cttgataacaacagggatttgaacttgcaacgctttcctgacaaaaagaaatctgtcaag
aaggctgaaggcatgtatagtcaagcattcagtttctgtgagaaagttaaggagaagttg
agcagttctgatgattaccaaacgttcttgaagtgccttcatattttcagcaatggaata
attaaaaggaatgatttgcaaaatttggtaactgatttactcggaaagcattcggatctt
atggatgaattcaatgatttcttggagcgttgtgaaaatattgatggattccttgctggt
gtcatgagtaaaaagtcgctgtctactgatgctcatttatcaagatcatcaaaattggag
gacaaggacaaagagcacaagcgcgatatggatggagctaaagagaaggaaagatacagg
gagaaatacatgggaaaatcaattcaagaacttgaccttagtgactgtaaacgttgcact
cccagctaccgacttctgcctgcagattatccaattcctacagctagtcagagatccgag
cttggtgctcaagtcttgaatgaccattgggtatctgtgacttctggaagtgaggattac
tctttcaaacatatgcgcagaaatcagtatgaagagagcttgttcagatgtgaagatgac
agatatgagctggacatgttattagagtctgtgagttcagctgctaaaaaagcagaggaa
ttgtataataacatcaatgaaaataaaattggcatggagactctgaaccgtattgaagat
cactttactgttctgaatttaaggtgcattgaacgtttatacggtgatcatggtctggat
gttatagacatattgcgtaaaaacccaacccatgccctgcctgtaatattgactcgactg
aagcagaagcaagaggagtggagtaagtgtcgttcagatttcaataaagtatgggctgaa
atttatgctaaaaatcactacaaatcacttgatcatcgtagcttctacttcaaacagcaa
gattcaaagaacttgagcaccaaatctttggttactgagattaaagaaattaaagaaaag
cagcagaaagaggatgatattattcagtctattgcagctggaaataaacagcctctaatt
ccacatctggaatttgaatattctgatgttgggattcatgaagacctgtataaacttgtt
tgttattcatgtgaggagttattctcaagtaaggagttgttaaataaaattatgaggctc
tggagtaccttcttggagccaatgcttggtgttccttcccaatctcatggaacagaaagg
gccgaggacagaaaaactgggcataatgttcgcaattttggtgcaccaaatatcgggggt
gatggaagtccccgtggagactctcttttaatgaattcaagggtaccaaaatctgataag
aatgaagctgatggtagagtaactgaagtgaagaatgttcaccggactactgtggcatcc
aatgataaagaaaatggatctgttggtggcgaacttgttagtagagatgatcctttaatg
gataaaggacagaaaaatgtagaatacaatgataaagcttctggatttagcaaacaattt
acctctgatgagcaaggagctaaaaacaatgtatcaattgcaattagaggagaaaacagc
ctgaacagaactaacttagatgtgtctccaggccgtgcccttactccatcgcgacctact
gatgttgatgactctgtatccaagtctcagggtgttaatgcaccatcggtggagggatgt
gacatggcaactccagtaccagtggccaatggtgttctaagtgagagcagtaaagttaaa
actcacgatgaatcagttgggccttgcaaaattgaaaaggaagagggtgaattgtcacca
aatggtgactctgaggaggataacattgttgcttatggagattcaaatgtgcaatcaatg
gccaagtcaaagcacaacattgaaagaaggaaatatcagtctagaaatggagaggatgaa
tcttgtcctgaggctggaggtgacaatgatgcagatgcagatgatgaggacagtgaaaat
gtttctgaagctggtgaagatgtctcaggcagtgaatctgctggtgatgaatgcttccgt
gaagatcatgaagaggaggaggatatagaacatgatgatgttgatggtaaggctgagagt
gaaggtgaagctgaggggatatgtgatgcacaagcaggaggagatggcacatctttgcca
ttgtcagagaggttcctttcatctgtgaaacctctcacaaagcatgtatcagcagtttca
tttgtcgaagaaatgaaggactcaagggtgttctatggaaatgatgacttctatgtgttt
tttagacttcatcaagctctttatgagaggctcttatcagcaaaaacacattcaatgagc
gcagaaatgaaatggaaagcaaaagatgctagttcaccagatccttattcaagatttatc
aatgcattgtacaacttgcttgatggatctgccgaaaatgcaaagtttgaagatgaatgc
cgggcaattattgggaaccagtcatatgtgttattcacattggacaagttaatatacaaa
ttggtcagacagcttcaaactgtcgcaaccgatgaggtagacaataagcttctccaatta
tatgaatatgaaaagtctcgcaagcctgggaagttaaatgattctgtatatcatgcaaat
gctcatgtcatccttcatgaggagaatatatatcgtttacaatgttcctctaccccctca
cgactatccatccagctcatggacaatatgaatgaaaagcctgagttgtttgccgtttcc
attgatccaaatttctctttttatctgcacaatgattttctgtctgtctttcccaacaaa
aaggagccccatggcatcatactgcatagaaacaaacgccaatatggaaaattagatgag
ctttctgcaatatgctctgccatggaaggtgttaaagtaattaatggattggaatgtaag
atagcttgcagctcatctaagatttcttatgttcttgacacacaagattttttcttccga
ccaagaaagaaaagacgaacgccttcagggaccacaacctcccggttccgcagggacaga
gaggaaagattccgcaaattgttggcatgctcgtaa
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