Glycine max (soybean): 100812519
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Entry
100812519 CDS
T01710
Name
(RefSeq) protein RDM16 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100812519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100812519
Spliceosome [BR:
gmx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100812519
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
100812519
NCBI-ProteinID:
XP_006590457
UniProt:
K7LMH4
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Position
11:complement(876012..881742)
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AA seq
881 aa
AA seq
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MDDRVKSEKRSRDRHLERDDKYHQDSDDIRHHRSDRNHKCDHKSRDRDRDRAYDREGIKD
RNRAYDREGSRDRDRAYDREGSKDRERAYDREGSKDRDREYEREGSKVRLKGKHDEGRED
LVEPRLSSHSHKRKEREHSEDRDYEDKKIRISEERKEGRRERRKFGDKVKKEEEEEEEEE
EEEEEDGNDNIRGIHEAKVKEEVTDGAHGSASSNGTVFIQNGALGSPAVAPMSVPETSLA
PPPSVPIKVSSNSTTNENKGISITRSHEVTGKSSTDGSSSTARKTGSLSIDALAKAKKAL
QMQKELSEKLKKIPQLNKSSTQNSQGSSNLGSMNESAVPSSAAGVASKSSTSASLVHAAN
MSIFPSTAFAASANTPVIGTSAAGIPNATLPNWEAVRRAQELAARMGFRQDPQFAPLINM
FPGQMVTDVTLLQKPMKAPVLRLDAQGREIDEHGNVINVTKPINLSTLKVNINKQKKEAF
EILQPVLDVDPESNPHFDASMGINKTKLLRPKRMNFQFVEEGKWSKDAETIKLKSKFGEA
QAKEHKAKLAQLAKAKAAPDINPNLIEITERVVIKEKPKDQIPDIEWWDVPLLHCRNYGD
IDNGTIGEDKLKIEKITFYVEHPRPVEPPAEPAPPPPQPLKLTKQEQKKLRTQRRIAKEK
ERQEMIRQGVIEPPKPKVKISNLMKVLGSEATQDPTRLEKEIRTAAAEREQAHIDRNIAR
KLTPAELREKKEKKLFDDPNTLETLVSLYRINDLSHPKARFRVDVNAQENRLTGCAVICD
GISVVVVEGGSKSIKRYGKLMLRRINWSEVSKDKEENEDSDDDKPANKCVLVWQGSVAKP
SFNRFSVHDCITEAAARKVFADAGVPHYWDQAVNYKEDEAI
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagagtcaaatctgaaaagagaagcagagatcgacacttggaacgtgatgac
aaataccatcaagattctgatgatatccgccatcatcgatcagacaggaatcacaagtgt
gaccacaaatcaagggacagggatagggatagggcttatgacagagaaggaatcaaggat
aggaatagggcttatgacagagaaggaagcagggatagggatagggcttatgacagagaa
ggaagcaaggatagggaaagggcttatgacagagaaggaagcaaggatagggatagggaa
tacgaaagagagggtagcaaagttaggttgaaggggaagcatgatgaggggagggaagat
ttggtggagccacgactctcgtcacattctcataagcggaaagagagggagcacagtgag
gacagggactacgaggataagaaaattaggatttccgaggagaggaaggaagggagaagg
gaacggaggaaatttggggataaagtcaagaaggaggaagaagaagaagaagaagaagaa
gaagaagaagaagaagatggtaatgataatattagaggcattcatgaggccaaggtcaag
gaggaagtcactgatggtgcccatggctcagcttcttccaatggcactgtgtttatccaa
aacggtgccctgggatcacctgctgtggcccccatgagtgtgcctgaaacatctttggct
cctcctccttctgttcctatcaaggtatcttcgaattctaccacaaatgaaaataagggc
attagtattaccaggtctcatgaggttactggaaaatctagtacagatgggtcatcttca
actgctagaaaaactgggagcctctctattgatgccctagctaaggctaagaaagcttta
caaatgcagaaagagttgtcagaaaagctaaagaaaattcctcagttgaataagagttct
acccaaaattcacaaggaagctctaacttgggctcaatgaatgaatctgcagtaccctct
tctgctgctggagtggcatcaaaaagttccacgtcagcttctttggtccatgctgcaaat
atgtcaattttcccctcaactgcttttgctgcttctgctaatactccagtaattggcact
agtgctgctggtattccaaatgcaactctgcccaactgggaagctgtcaggcgtgctcaa
gagcttgctgccaggatgggatttcgtcaagatccacaatttgctcctctgataaacatg
tttcctggtcagatggtaacagatgttactctcctgcagaaacccatgaaggcccctgtt
cttcgtcttgatgctcagggacgggaaatagatgagcatggaaatgttattaatgtgact
aagcccatcaaccttagcacattaaaggtcaacattaacaaacaaaagaaagaagcattt
gaaatactacaacctgtattagatgtcgatcctgaatctaatcctcattttgatgcaagc
atgggtatcaacaaaacaaagctcctgcggcccaagaggatgaatttccaatttgttgag
gaaggaaaatggtcaaaagatgctgaaacaataaaattgaagagtaaatttggagaagct
caagcaaaagagcacaaggccaaactggcacagttggcaaaggcaaaggctgctcctgat
ataaatcctaacttaatagaaataacagagagagttgtaattaaagaaaagcccaaggac
caaattccagacattgagtggtgggatgtgccacttctgcattgtcgaaattatggtgac
attgataatggaaccattggcgaagataaactgaaaatagaaaaaatcactttttatgtg
gagcatcctcgtccagttgagccacctgctgagcctgctcccccaccacctcaaccactc
aagctaactaagcaagagcagaagaaactccggacacaaagacgtatagctaaggagaaa
gagcgacaggagatgataagacagggtgtcatagaaccaccaaaaccaaaggtcaagatt
agcaatttaatgaaagtacttggctctgaagcaactcaagatcctactcggctcgaaaag
gaaatacgtactgcagctgcggagcgtgagcaggctcacatagataggaacattgcacgc
aagcttactcctgctgagctgcgggagaagaaggagaagaagttgttcgatgacccaaat
acactggagacacttgtctctctttacaggataaatgacctctcacatccaaaggccaga
ttcagagttgacgttaatgctcaagagaaccgtttgactggatgtgctgtgatttgtgat
ggtattagtgttgttgttgttgaaggtggaagcaagtccattaagaggtatgggaaactt
atgcttagacgtattaattggagtgaagtttcaaaagataaagaagaaaatgaagattca
gatgatgacaagcctgccaataagtgtgttctggtgtggcaaggaagtgttgccaaaccc
agcttcaataggttcagtgtccatgattgcatcaccgaagctgctgcccgaaaagttttt
gcggatgctggcgttcctcattattgggaccaagccgtgaactacaaagaagatgaagct
atttaa
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