KEGG   Glycine max (soybean): 100812580
Entry
100812580         CDS       T01710                                 
Symbol
SIG5B
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
  KO
K03093  RNA polymerase sigma-I factor
Organism
gmx  Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmx03021]
    100812580 (SIG5B)
Transcription machinery [BR:gmx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     100812580 (SIG5B)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2
Other DBs
NCBI-GeneID: 100812580
NCBI-ProteinID: NP_001276145
UniProt: I0IJP0
LinkDB
Position
6:10216424..10219964
AA seq 507 aa
MGVVTVSSSAARTPLGLNTKFCNNRLKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKK
TQKKRIGKTNKLPKRESSPSSMDVDYNEAAAMLENLYKLSPASDNAECIDGKIKRVSRRG
KKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRKKRNVGNKI
EKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELT
REPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQD
LCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQ
KAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVD
DDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISRE
MVRKHEVKALMKLKHSARLDYLRRYVV
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgggagttgtgactgtttctagctcggctgctcggactccattgggattgaatacaaag
ttttgcaataatcgtctgaagagacctttaattgtagcatttaagggggataagcacaat
gactcagctttggttgcaacacaagagaaaattcctgtgccggttgaaacggcgaagaag
acgcagaaaaagaggataggaaaaactaacaaactacctaagagagagagttctccatct
tccatggatgtggactacaatgaagctgctgccatgcttgaaaatctatacaaacttagc
cctgcttctgataatgcagaatgcatagatggtaaaatcaaaagagtctctcggagaggg
aagaaggttgttgatgaaagtgaagaaaaggagttaaagggcgattgggtggtcagaaac
cagaacaagaacaagaaacctaaacgattgaatcttgatcagagaatttcattaaagaat
aacaaaagtggggacgaagtcattccaactcgaaagaaaagaaatgttgggaacaaaatt
gagaagattgaagaacttattcgggaatattcagtatcaactgattttgtcagtatggat
tggaaaagaatgagaatacctcccgttctttcttcttcagagcatgcttggttgttcaaa
ttgatgcaacctatgaaggcactgcttcaagtgaaagaagatttacagcaggagttgaca
agagaacctgcagatggtgaactagctgatgcaacaaacatgagcattacacaagtaagg
aaagcaatagatgttggtcaagctgcaagaaataaactcataaagcacaatctccggctt
gttttgttcgtgatcaacaaatattttacagattttgcaagtggccctaggtttcaagat
ctttgccaggcaggagttaaggggcttataacagcaatcgatcgttttgagccaaacagg
agatttcggctatcaacttatagtttgttttggataagacatgctatcattcgttcaatg
accctctcaaacttcacacgtgttccctttggacttgaatcggttcgagcagaaattcaa
aaagctaaaactgagttaacatttgagcttcagaggtcaccaacagaggaagaaataata
gaaagagttcatatatcccctgaaagataccatgacgtaattaaggcatcaaaatccatt
ctttctctgaactcgagacatacaaccacacaagaggagttcattaatgggatcgttgat
gatgatggtgttaatggtgataataggaaacaacctgctctactaaggcttgctcttgat
gatgtgcttgattccctgaagccgaaggagagcttggtgatcagacagagatttggactt
gatggcaagggtgacagaacattgggagaaattgctgggaacttgaatatatctagggaa
atggttagaaagcacgaagtcaaggctcttatgaagctcaagcattcagctagattggat
tatcttcgccgttatgttgtataa

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