Glycine max (soybean): 100812580
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Entry
100812580 CDS
T01710
Symbol
SIG5B
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100812580 (SIG5B)
Transcription machinery [BR:
gmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
100812580 (SIG5B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
100812580
NCBI-ProteinID:
NP_001276145
UniProt:
I0IJP0
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Position
6:10216424..10219964
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AA seq
507 aa
AA seq
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MGVVTVSSSAARTPLGLNTKFCNNRLKRPLIVAFKGDKHNDSALVATQEKIPVPVETAKK
TQKKRIGKTNKLPKRESSPSSMDVDYNEAAAMLENLYKLSPASDNAECIDGKIKRVSRRG
KKVVDESEEKELKGDWVVRNQNKNKKPKRLNLDQRISLKNNKSGDEVIPTRKKRNVGNKI
EKIEELIREYSVSTDFVSMDWKRMRIPPVLSSSEHAWLFKLMQPMKALLQVKEDLQQELT
REPADGELADATNMSITQVRKAIDVGQAARNKLIKHNLRLVLFVINKYFTDFASGPRFQD
LCQAGVKGLITAIDRFEPNRRFRLSTYSLFWIRHAIIRSMTLSNFTRVPFGLESVRAEIQ
KAKTELTFELQRSPTEEEIIERVHISPERYHDVIKASKSILSLNSRHTTTQEEFINGIVD
DDGVNGDNRKQPALLRLALDDVLDSLKPKESLVIRQRFGLDGKGDRTLGEIAGNLNISRE
MVRKHEVKALMKLKHSARLDYLRRYVV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcggctgctcggactccattgggattgaatacaaag
ttttgcaataatcgtctgaagagacctttaattgtagcatttaagggggataagcacaat
gactcagctttggttgcaacacaagagaaaattcctgtgccggttgaaacggcgaagaag
acgcagaaaaagaggataggaaaaactaacaaactacctaagagagagagttctccatct
tccatggatgtggactacaatgaagctgctgccatgcttgaaaatctatacaaacttagc
cctgcttctgataatgcagaatgcatagatggtaaaatcaaaagagtctctcggagaggg
aagaaggttgttgatgaaagtgaagaaaaggagttaaagggcgattgggtggtcagaaac
cagaacaagaacaagaaacctaaacgattgaatcttgatcagagaatttcattaaagaat
aacaaaagtggggacgaagtcattccaactcgaaagaaaagaaatgttgggaacaaaatt
gagaagattgaagaacttattcgggaatattcagtatcaactgattttgtcagtatggat
tggaaaagaatgagaatacctcccgttctttcttcttcagagcatgcttggttgttcaaa
ttgatgcaacctatgaaggcactgcttcaagtgaaagaagatttacagcaggagttgaca
agagaacctgcagatggtgaactagctgatgcaacaaacatgagcattacacaagtaagg
aaagcaatagatgttggtcaagctgcaagaaataaactcataaagcacaatctccggctt
gttttgttcgtgatcaacaaatattttacagattttgcaagtggccctaggtttcaagat
ctttgccaggcaggagttaaggggcttataacagcaatcgatcgttttgagccaaacagg
agatttcggctatcaacttatagtttgttttggataagacatgctatcattcgttcaatg
accctctcaaacttcacacgtgttccctttggacttgaatcggttcgagcagaaattcaa
aaagctaaaactgagttaacatttgagcttcagaggtcaccaacagaggaagaaataata
gaaagagttcatatatcccctgaaagataccatgacgtaattaaggcatcaaaatccatt
ctttctctgaactcgagacatacaaccacacaagaggagttcattaatgggatcgttgat
gatgatggtgttaatggtgataataggaaacaacctgctctactaaggcttgctcttgat
gatgtgcttgattccctgaagccgaaggagagcttggtgatcagacagagatttggactt
gatggcaagggtgacagaacattgggagaaattgctgggaacttgaatatatctagggaa
atggttagaaagcacgaagtcaaggctcttatgaagctcaagcattcagctagattggat
tatcttcgccgttatgttgtataa
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