Glycine max (soybean): 100812671
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Entry
100812671 CDS
T01710
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmx03009
]
100812671
04121 Ubiquitin system [BR:
gmx04121
]
100812671
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
90S particles
Other 90S particles
100812671
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100812671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_DCAF4
WD40_RFWD3
NBCH_WD40
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
eIF2A
PROPPIN
Beta-prop_Vps41
VID27
Motif
Other DBs
NCBI-GeneID:
100812671
NCBI-ProteinID:
XP_003519367
UniProt:
I1JI32
LinkDB
All DBs
Position
2:45716112..45722301
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AA seq
452 aa
AA seq
DB search
MKVKVISRSVDEFTRERSQDLQRVFRNYDPSLRPQEKAVEYVRAVNAVKLDKIFARPFIG
ALDGHVDAVSCMTRNPSQLKGIFSSSMDGDIRLWDLAARRTVCQFPGHRGAVRGLTASTD
GRILVSCGTDCTIRLWSVPITTLMESDDSTKSTVEPASVYVWKNAFWGADHQWDGEHFAT
AGAQVDIWNHNRSQPINSFEWGSDTVISVRFNPGEPNLLATSASDRSIILYDLRMSSPVR
KMIMMTKTNSICWNPMEPINFTAANEDGNCYSYDARKLDEAKCVHRDHVSAVMDVDYSPT
GREFVTGSYDRTVRIFQYNGGHSKEIYHTKRMQRVFAVKFSGDGSYVISGSDDTNLRLWK
AKASEQLGVILPRERKKHEYHEAIKKRYKHLPEVNRIARHRHLPRPIFKASALMRVMADA
KRRKEEKRKAHSAPGSITTQPLRRRRIIKEVE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaaagttatatcacgctccgtggatgagttcacccgagagcgaagtcaagac
cttcagagggtgttccggaattacgatcccagccttcgtcctcaagagaaggcggtggag
tatgtgcgtgctgttaatgcggtgaagttggacaagatatttgcaagaccatttattgga
gcattggatgggcatgtagatgctgtttcgtgtatgacgaggaaccctagccagttgaaa
gggatattctccagttcgatggatggagatattcgtctctgggatttagctgcaagacgg
acagtttgtcagtttcctggtcaccgaggtgctgtacgaggcttgacagcatctacagat
ggacgcattcttgtgtcatgtggaactgattgcactatcagactctggagtgttcctatt
actactcttatggagtcagatgactcaactaagagcactgttgagccagcaagtgtttat
gtttggaagaatgcattttggggtgctgatcaccagtgggatggcgagcattttgccaca
gctggtgctcaagtagatatatggaatcacaacaggtctcagccaataaacagttttgaa
tgggggtcagatactgtaatttctgtccggtttaatcctggagaaccaaatctgttggcc
acctcagctagtgaccggagcataattctgtatgatttacgtatgtcttccccagtgagg
aaaatgataatgatgaccaaaacaaattctatatgttggaacccaatggaacccataaat
tttacggctgcaaatgaagatggtaactgctatagctatgatgctaggaagttagatgaa
gctaaatgtgttcacagagatcatgtttctgcagtgatggatgttgactactcaccaacc
ggacgggagtttgtcactggatcttatgatagaacagtgagaattttccagtataatggt
ggtcacagcaaggagatttatcatactaagagaatgcaaagggtatttgctgtcaagttc
agtggtgatggaagttatgtgatttcaggaagtgatgacactaaccttaggctttggaag
gcaaaagcatcggagcaacttggagtaattctcccaagggaacggaagaagcatgagtat
catgaagccataaaaaaacgctataagcacctccctgaagttaaccgtatcgcaagacat
agacacttgccaagaccaatattcaaagcttctgctttaatgcgcgttatggcggatgct
aagagaaggaaggaagagaagaggaaagctcacagtgctccagggagtattacaacacag
ccattacgaagacgaagaattatcaaagaagtcgagtga
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