Glycine max (soybean): 100813510
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Entry
100813510 CDS
T01710
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100813510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100813510
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100813510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
100813510
NCBI-ProteinID:
XP_040865579
UniProt:
A0A0R0G2B2
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Position
15:complement(15796553..15802784)
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AA seq
248 aa
AA seq
DB search
MKWFTISTSRHDTNKVVCGTHPLGGMPTNCRRRRRRSATALHDPNSGNDDQSLEFDIYPL
SSYYFGSKDAFPSKYLTSADRVLRMKSNYAARGIRTCVEAVVLVELFKHPHLLLLQIRNS
IYKLPGGRLRPGESDTDGLKRKLARKLSIIEDGDGSEWEVGECLEMWWRPDFETLVFPCL
PPNVKQTKECIKVFLVKLPESRKFIVPKNMRLLAVPLCQVHENHKTYGKIISGVPQLLSK
FSFNMIES
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtttacgatctcaacctctaggcatgacaccaacaaagtggtttgtgggact
caccctctaggtggaatgccaacaaattgtaggagaagaagaagaagaagtgccacagct
ttgcatgatccaaacagcggaaacgatgatcagagcctcgaattcgatatttatcctttg
agcagttactactttggatccaaagatgcctttccctccaaatacctcacctcagctgat
cgtgttctcaggatgaaatccaactatgctgcccgaggaatacgaacctgtgtggaagct
gtcgtactggttgaattgttcaaacatcctcatttgttgctgttgcaaataagaaattcc
atatataaacttcctggtggccgattaaggcctggtgaatcagatactgatggattgaag
cgtaagctggcaaggaaactctccattatcgaagatggggatgggtcagaatgggaggtg
ggtgaatgccttgagatgtggtggaggcctgattttgaaacattagtgtttccttgtttg
ccacctaatgtgaaacagacaaaggagtgtatcaaagtcttccttgtgaagcttccagag
agtcgaaaattcattgtgccaaaaaacatgaggttgcttgcagtcccattgtgccaagtt
catgaaaatcacaagacatatgggaaaattatatcaggggtcccacagttgctgtcaaaa
ttctctttcaacatgattgaatcgtga
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