Glycine max (soybean): 100813730
Help
Entry
100813730 CDS
T01710
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100813730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100813730
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
100813730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
100813730
NCBI-ProteinID:
XP_006586768
UniProt:
I1KZY8
LinkDB
All DBs
Position
9:complement(773246..779107)
Genome browser
AA seq
536 aa
AA seq
DB search
MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN
VRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL
EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDNESNTGGGRSHKKTDEDDEGHVSDKGE
EDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKKLLGKASGLNESDAEDD
DDDDDDVDDDVGVPPVIATKQKDALKEEPIDNSPSKPTATGPARGTPSSKSSKGKRKLNE
ETKPSNTATPKKEPKLSAKDVNGSASKSSAPPKGTPPLSSKGGSSTTTTASGPVSEEEIR
AVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTTGASYVILRDK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgacctgcaattgaagtcgagttgtagcggatgcggatcaacgacggatctc
tacggaagcaattgcaagcacatgactctgtgcttgggctgcggcaaaaccatggcggcc
aaacgcgccaaatgcgttgattgtggcgccaccctcactcgtttgattcgagaatataat
gttcgtgcaagttcccccaatgataagaattacttcattggaaggttcataaacggtttg
cctgatttttcgaagaagaaaagtgctgagaacaagtggtctctgcagaaggatggacta
cacggacgccaaattactgatactttgcgggagaagtacaagaacaagccttggctcttg
gaggatgaaacaggtcagtcccagttccagggtcatctagaaggttcacaatcggctaca
tattacctgctaatgaaggaaaggaaggagtttgttgccattcctgctggttcttggtac
aactttaacaaggttgctcaatataagcaattgacattggaggaagcagaagagaagatg
aagaatagaaagaaaactgcagatggatatcaaagatggatgatgaaagcagcaaataat
ggcccagctgcatttggtgaacatgggaaatttgatgacaacgaaagcaacacgggtgga
gggagaagccataaaaaaactgatgaggatgatgaaggtcatgtgtctgataagggagag
gaggatgaagaggaggaatcagaaaggaagagtagacttggacttaataaaagagctggt
gaagatgatgaagaaggtccaaggggaggggaccatgatctagatgacgacgatgttgag
aagggcgatgattgggagcatgaagagattttcactgatgatgatgaagctgttggcaat
gatcctgaggaaagggaggatttggctcctgaagttcctgctcctcctgaaatcaagcag
gatgaggaggaggaagatgaagataatgaagagggagaaggtctgagtaaatctgggaaa
gagctgaagaagctgcttggaaaagctagtggtctgaatgaatctgatgcagaggatgat
gatgacgatgacgatgatgtggatgatgatgttggtgtccctcctgtcattgctacaaag
caaaaggatgcccttaaggaagaacccattgacaatagcccttcaaagccaacagcaaca
ggacctgctcgtggaacaccttcttcaaagtcttcaaaggggaagagaaaattaaatgaa
gaaacaaagccatctaataccgcaactccaaagaaggaaccaaaattgtccgccaaagat
gtaaatggatctgcatctaaaagtagtgcacctccaaaaggtacacctccattgtcatca
aagggcgggtcttccacaacaacaacagcttctggaccggtgagtgaggaagaaattagg
gctgttttaaggcagaagactccggtgaccactcaggatcttgtagctaaatttaaggca
agactaagatgttcagaggataagcaagcatttgctgagatccttaagcgaatctctaag
atacagaagactacaactggagccagttatgttatcctgagagataagtga
DBGET
integrated database retrieval system
