Glycine max (soybean): 100813735
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Entry
100813735 CDS
T01710
Name
(RefSeq) polyadenylate-binding protein 2
KO
K13126
polyadenylate-binding protein
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100813735
09123 Folding, sorting and degradation
03018 RNA degradation
100813735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100813735
03041 Spliceosome [BR:
gmx03041
]
100813735
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100813735
mRNA cycle factors
Stress granule specific factors
100813735
Spliceosome [BR:
gmx03041
]
Complex C
Other components
Complex C specific factors
100813735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_7
RRM_RdRP1_2
RRM_MARF1
PABC_AtC3H46
DUF5062
PH_35
Motif
Other DBs
NCBI-GeneID:
100813735
NCBI-ProteinID:
XP_006574897
UniProt:
I1JE12
LinkDB
All DBs
Position
2:complement(9813483..9819219)
Genome browser
AA seq
648 aa
AA seq
DB search
MAQVQVPPQNAIPGPNGGGAAGNQFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVC
RDLTSRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFI
KNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGML
LNDKQVYVGPFLRKQERESTADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITSAVVMR
DGDGKSKCFGFVNFENADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSM
KEAADKYQGANLYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTP
DEASRALLEMNGKMVVSKPLYVTLAQRKEDRRARLQAQFAQMRPVGMPPSVGPRVPMYPP
GGPGIGQQIFYAQGPPAIIPSQPGFGYQQQLVPGMRPGAAPVPNFFVPMVQQGQQGQRPG
GRRTGAVQQSQQPVPMMPQQMLPRGRVYRYPPGRGMPDVSMPGVAGGMFSVPYDVGGMPL
RDASISQQIPVGALATALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTE
VLHLLESPEALKAKVAEAMDVLRNVAQQQAGGTADQLASLSLNDNLVS
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggttcaggttccgcctcagaatgcgattcccggccccaacggtggtggtgct
gctggaaatcagttcgtgacgacgtcgctttacgtcggagatctcgacccgaacgtcacg
gacgcccagctgtatgatttgttcaaccaattggggcaagtcgtatccgttagggtttgc
agggacttgaccagtaggagatcgctcggttatggttatgtcaactttagcaacccgcaa
gatgctgccagagctttggatgttctgaacttcactcctctcaataacaggcccatccgt
atcatgtattcgcatcgtgatcccagtatccgtaaaagtgggcaaggaaatatatttatt
aagaatttggatagggcaattgaccacaaggcgttgcatgatactttttctacatttggg
aatatcctttcgtgcaaggtagctacagattcatctgggcaatcaaagggctatggcttt
gttcaatttgataatgaggaatctgcccaaaaggccattgagaagctgaatggaatgctg
ctgaatgataaacaagtgtatgtgggacccttccttcgcaagcaagagagagaaagtact
gctgacaaggcaaagttcaacaatgtttttgtgaagaatctgtcagaatcaaccactgat
gatgaattgaagaatgtttttggtgaatttggaactattactagtgctgtcgtaatgagg
gatggagatgggaaatcaaagtgttttggatttgtgaattttgagaatgctgatgatgct
gctagggctgttgaggctctcaatggcaaaaagtttgatgacaaagaatggtatgttgga
aaagctcaaaagaaatctgaaagggagaatgaattgaaacaacgatttgagcagagcatg
aaagaagctgctgataaatatcaaggggcaaacttgtatgtcaaaaatttagatgatagc
ctcggtgatgataaacttaaggagctgttctccccttttggtaccataacttcttgcaag
gttatgagagacccaaatggcataagtcgtggatcaggatttgttgcattctcaactcct
gatgaggcatctagagcactcttggagatgaatggcaaaatggtggtaagcaaacctctg
tatgtgactctagcccaacggaaagaagataggagagctagactgcaggctcagtttgct
caaatgcgacctgttggaatgccaccatctgtcggtcctcgtgtgccaatgtatccccca
ggtggtccaggtattggtcaacaaatattttatgcccaaggccctcctgctatcattcct
tcccagcctggatttgggtatcaacaacaacttgttcctggtatgaggccaggtgcagct
cccgtgccaaatttctttgtgccaatggttcagcagggacaacagggacagcgtcctggt
ggaaggcgtacaggtgcagtccagcagtcccagcagcccgttccaatgatgccacagcag
atgctacctagggggcgtgtctatcgttatcctcctggtaggggtatgccagatgtttct
atgcccggggttgctggaggtatgttttctgttccatatgatgtgggtgggatgccactg
cgtgatgcatcaatctcccagcaaattcctgttggggctttagcaacagctctggctaat
gcttctccagagcagcagaggacgatgctgggtgagaatctctacccccttgtggaacag
ttagagcctgacaatgctgccaaagtgacaggcatgcttcttgagatggaccagactgaa
gttctgcatttgctcgagtcgccagaagccctgaaagcaaaggtggcggaggcaatggac
gtcctaagaaatgttgctcagcaacaggctggcggtactgcggatcagctggcttcatta
tctcttaatgacaaccttgtttcttaa
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