Glycine max (soybean): 100813748
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Entry
100813748 CDS
T01710
Name
(RefSeq) uncharacterized PE-PGRS family protein PE_PGRS46
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
gmx
Glycine max (soybean)
Pathway
gmx03015
mRNA surveillance pathway
gmx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100813748
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100813748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100813748
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100813748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100813748
NCBI-ProteinID:
XP_003551440
UniProt:
I1N0A5
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Position
18:7303181..7307808
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AA seq
696 aa
AA seq
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MDEGEGGYGESGDPMDQFHRNEAISAVADEGFLGEEEDDDYEDLYNDVNVGEGFLQSLRK
NDDSGFRNDEVEEKKPPPPPPVPDAAGVSIPGVGGGGGSGVVESRVSGRVDGFQNQGYRG
NEVGAKGGIRIELGNQSGNLSEIEDQGGNDGAAMQGIGQQPHGGVVGIVGNEGLVRQGQG
GVGGGGGGGNVNRVGGNGVGNSVSAVTSVNTGGVGGAGGGGGAAGSGGTILFVGDLHWWT
TDAELETELSRYGPVKEVKFFDEKASGKSKGYCQVEFFDPSAATACKEGMNGHVFNGRPC
VVAFASPFTVKKMGEAQINRNQQMNQSAVPQGRRGPADAGAKPGGSNISTGGNYQGGEGN
RGYGRGGGNWGRGNNPGMGNRGPVNPMRNRGGGMGGRGIMGHGGNGFGQGMGGTPPMLHP
QSMMNQGFDPAFGGPMGRMGGYGGFPGAPAPPFSGILPSFPGVGGVGLPGVAPHVNPAFF
GRGMPVNGMGMMPGSVMDGPNMGMWSDPNMGGWGGEEPGGGKAGESSYGEEAASDQQYGE
VSHDRAGWPMREKDRGSERDWSGSSERRYRDDRDQGYERDASREKDMGHDHEWSERRHRD
DRETGRERSRDRERSRDRDRDRDREKDLRERDRHREDRDGYADHHRFRDREAEHDDEWER
GRSSRTHSKSRLSQEEEHHSRPRDADYGKRRRLTSE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggcgagggagggtacggtgagagcggcgatcccatggatcagttccaccgt
aacgaagctatatccgccgtcgccgacgagggtttcttgggcgaggaagaagacgacgat
tacgaggacctttacaacgacgtcaacgtcggcgaagggttccttcaatcgttgcgcaag
aacgacgattcggggttccgaaacgacgaggtcgaagaaaagaagcctccgccgccgccg
ccggttccggatgccgccggggtttcgattccgggtgtcggtggcggtggaggaagcggg
gttgtggaatctagggtttcggggagggttgatgggtttcagaatcaagggtatagaggg
aacgaggtgggtgccaaaggtgggattaggattgaattagggaaccaatctggaaatttg
agtgaaattgaggatcagggtgggaatgatggtgctgcaatgcaggggattggacagcaa
cctcatggtggggttgttgggattgtgggaaatgagggtttggtgagacaaggtcaaggt
ggtgttggtggtggtggaggaggagggaatgttaatagggttggtggaaatggtgttgga
aacagtgtgagtgctgttactagtgttaatactggaggagttggaggtgctggtggtggt
ggtggtgctgccggttctggtggtactatattgtttgtgggtgatttgcattggtggact
actgatgccgagcttgaaaccgagcttagtaggtatgggcctgtgaaggaggtgaagttt
ttcgatgagaaggcgagtgggaaatcaaaggggtattgccaggttgagttttttgatcct
tctgctgcaactgcttgcaaggaagggatgaatgggcatgtttttaatgggaggccgtgt
gtcgttgcatttgcttcaccttttaccgttaagaaaatgggggaggctcagataaacaga
aatcagcagatgaaccaatctgctgttcctcagggaaggagggggcctgctgacgcaggg
gctaaacctggtgggagtaatatttcaacgggtggtaattaccaaggtggagaggggaat
agaggttatggaagaggaggaggtaactgggggagaggaaacaatcctggtatggggaat
agagggcctgttaatccaatgaggaacaggggtggtgggatgggtggtagaggtataatg
ggccatggtggaaatggatttggacagggtatgggtggtacccctccaatgttgcatcct
cagtcaatgatgaatcagggttttgatcctgcatttggtggtcccatgggcagaatgggt
ggctatggaggctttcctggtgctccggcgcctccgttttcgggtattttgccttcattc
cctggtgttggaggtgttggtttgcctggagtggcacctcatgttaatccagcctttttt
ggaagagggatgcctgttaatggtatggggatgatgcccggatcagtcatggatggtcct
aatatgggaatgtggtcggatccaaatatgggtggatggggtggtgaagagcccggtggt
gggaaggctggagagtccagttatggggaggaagctgcttcagaccaacagtatggtgag
gtgagtcatgatagagctgggtggcctatgagggaaaaagatagaggttcggaaagggac
tggtctggttcttctgagagaaggtacagagatgatagagatcaaggatatgagagagat
gcatctagagaaaaagatatgggtcatgatcatgaatggtctgaaagaaggcatcgtgat
gatagagaaacgggcagagaacgatcccgtgaccgtgaacgatctcgagaccgtgatcgt
gatcgtgaccgtgaaaaggatctccgtgagcgtgacaggcacagagaagatagggatggg
tatgcagatcatcataggttcagagaccgggaagcagagcacgatgatgagtgggagagg
ggacggtcatcaaggactcacagcaagtcacgattatcgcaagaggaggaacaccattct
agaccaagagatgctgattatgggaagaggcggcgtcttacttctgaataa
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