Glycine max (soybean): 100814141
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Entry
100814141 CDS
T01710
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gmx
Glycine max (soybean)
Pathway
gmx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100814141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100814141
03009 Ribosome biogenesis [BR:
gmx03009
]
100814141
04131 Membrane trafficking [BR:
gmx04131
]
100814141
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100814141
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
100814141
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100814141
Membrane trafficking [BR:
gmx04131
]
SNARE
SNARE associated proteins
Others
100814141
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100814141
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100814141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_33
AAA_5
AAA_2
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
nSTAND3
AAA_28
AAA_17
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
Vps4_C
ABC_tran
AAA_7
Viral_helicase1
NB-ARC
AAA_24
TsaE
NACHT
AAA_lid_PRS2_C
DUF815
Zeta_toxin
Sigma54_activat
Sigma54_activ_2
Zot
Motif
Other DBs
NCBI-GeneID:
100814141
NCBI-ProteinID:
XP_003554388
UniProt:
I1NAA5
LinkDB
All DBs
Position
19:complement(44642357..44647149)
Genome browser
AA seq
808 aa
AA seq
DB search
MADQPESSDAKGTKRDFSTAILERKKALNRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPSEYCV
VAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVTNEHFQTALGSSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRKRDN
PEAMEEDDVEDEIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFA
DSTSSGGAATASDPFASAGGADEDDLYS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcaacctgaatcatcggacgctaagggcaccaagagagatttcagcaccgcg
attttggagcgtaagaaggctctgaatcggcttgtggttgatgaggccgtcaacgatgac
aactctgtcgtcgctcttcatcctgataccatggagaaacttcaactctttcgtggtgac
accatcttgatcaagggaaagaaaaggaaagatacagtctgtatcgcacttgccgatgag
acatgtgaggaaccaaaaataagaatgaacaaggttgtgagaaacaaccttagggttagg
cttggagatgttgtttcggtacatcagtgtcctgatgtcaaatatggaaagcgagtccac
attcttcctgtggatgatactattgaaggagtaacaggaaacctctttgatgcctactta
aaaccttatttcctggaggcatatcgaccagtgaggaagggtgacctcttccttgtgaga
gggggaatgaggagtgttgagttcaaggttattgaaactgacccttctgagtactgtgtt
gtcgccccagacacagagatcttctgtgaaggagagcctgttaaaagggaagatgagaat
agattagacgaggttggatatgatgatgttggtggtgtaagaaagcagatggcacagatc
cgggaattagtggaactgccactgaggcacccacagttattcaagtctattggtgttaag
ccaccaaaaggaattctgctgtacggacccccagggtctggtaagactttaattgctcga
gcagttgcaaatgaaactggtgccttctttttctgcatcaatggacctgagatcatgtca
aagctggctggtgaaagtgaaagcaatctgaggaaggcatttgaggaagcagagaaaaat
gcgccatccattatcttcattgatgagatagattcaatagctccaaagagggagaagact
catggtgaagtggagcggaggattgtttcccagctcttgaccctcatggatggtcttaaa
tcacgtgctcatgtaattgttattggagccacaaatcgccccaacagcattgaccctgct
cttaggaggttcggaagatttgaccgggagatagatattggtgttcctgatgaagttggg
cgtcttgaggttcttcgaattcatacaaagaacatgaaactcgctgaagatgttgatttg
gaaagaatatccaaggacacacatggttatgttggtgctgatctagctgctttgtgtact
gaagctgcacttcaatgcatcagagagaaaatggatgtgattgacttggaagatgagaca
attgatgctgaaatattgaactccatggcagtgacaaatgagcatttccagactgctctt
ggatcaagcaacccttctgctctccgtgaaacagttgttgaagtgcccaatgtcagctgg
gaagatattggtggtcttgaaaatgttaagagggaactccaagagactgttcaatatcca
gtggaacaccctgaaaaatttgagaagtttggaatgtcaccttcgaagggagttctcttt
tatggtcctcctggttgtggtaaaacacttttggcaaaagctattgccaatgaatgtcaa
gcaaacttcataagtgtcaaaggtcctgagctactcacaatgtggtttggagaaagtgag
gctaatgtgagggaaatttttgacaaggctcgcggttctgctccatgtgtcctattcttt
gatgaacttgactctattgcaactcagaggggtagtagtgtcggagatgctggtggtgct
gctgacagggttttgaaccaactgcttacagaaatggatggaatgtcggcgaagaaaact
gtgttcatcattggggccactaatcgaccagatattattgacccagctcttctgcgtcca
ggtcgtctcgaccagttgatttatatccctctcccagatgaggactcccgtcatcagata
tttaaagcttgcttgaggaaatccccagtctcgaaagatgttgatcttagggcgcttgcc
aagtacactcagggtttcagtggtgctgatataacagagatttgccagcgcgcgtgcaag
tatgccattagagagaacattgagaaggacattgagagagaaaggaggaaaagagataac
cctgaagcaatggaagaggatgatgttgaagatgaaatagcagaaatcaaggcagctcat
tttgaggaatcaatgaaatatgctcgaaggagtgttagcgatgccgacattcgcaagtac
caggcatttgcccaaacattacagcagtcaagagggtttggaagtgagttcaggtttgca
gattccacctccagtggtggtgctgccaccgcatctgatccatttgcttctgctggtgga
gctgatgaagatgatctttacagttag
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