Glycine max (soybean): 100814483
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Entry
100814483 CDS
T01710
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100814483
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100814483
Factors involved in mRNA localization
Other mRNA localization factors
100814483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
100814483
NCBI-ProteinID:
XP_006577329
UniProt:
I1JRU7
LinkDB
All DBs
Position
3:46028205..46050050
Genome browser
AA seq
1277 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTKA
LNQLNALTQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIV
FVVESLELDFALLFPERHILLRVLPVLVVLVTSSEKDSESLYKRVKINRLINIFKNEAVI
PAFPDLHLSPAAILKELSTYFPKFSSQTRLLTLPAPHELPPREAQEYQRHYLIINHIGAI
RAEHDDFVIRFASAMNQLLLLKSTDGSDVEWSKEVKGNMYDMIVEGFQLLSRWTARIWEQ
CAWKFSRPCKDASPSFSDYEKVVRYNYSAEERKALVELVSYIKSVGSMMQRCDTLVADAL
WETIHSEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTNKSESELQSSQH
GGEESKANIFYPRAVAPTAAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQL
ETFFYKLGFFLHILDYSATVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDCVLE
SPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVTKLCETIFTYY
KSWAASELLDPSFLFASDNAEKYAVQPIRLNMLLKITRVKLLGRMINLRSLITEWMNKVF
RENIEFLFGRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVS
FSSRLASQIWSEMQSDFLPNFILCNTTQRFIRSSRTVPVQKPSVPSVKPSFYCGTQDLNS
AHQSFARLHSGFFGIPHMFSVVRLLGSRSLPWLIRALLDHISNKITLLEPMITGLQDSLP
KSIGLLPFDGGVTGCVRLVKEHLNWETKSELKAEVLHGIKEIGSVLYWMGLLDIVLREKD
SMDFMQTAPWLGLLPGADGQIATSQDGGDSPVVSLFKSTAAAMVSYPGCPSPTSFHIMSK
QAEAADLLYKANLNTGSVLEYALAFTSAALDKYCNKWSAAPKTGFIDITISKDFYRIYSG
LQIGYLEESAQVPSNSHERLGDSVAWGGCTIIYLLGQQLHFELFDFSYQILNIAEVEAAS
VMQTHKNSQFSVKGWEALLEAMKKARRLNNHVFSMLKARCPLEEKTACAIKQSGAPIHRI
KFDNTVSAFETLPQKGS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacccgtcgaggaagccattgcagctctatccacattctcgctcgaggatgag
caaccagaggtgcagggacctggagtgtgggtgtcaactgagagaggtgcaacagaaagt
ccaatagagtatagcgatgtttctgcttacagactatctctatcagaggacacaaaagct
ctcaatcagctgaatgcccttacccaagagggaaaggagatggcatcggtgctttacaca
tatcgcagttgtgtcaaagcccttcctcagctacctgattctatgaagcaaagtcaagct
gacttatatttggaaacatatcaagttctggatttggaaatgagtcgtctacgtgaaatt
cagcgttggcaagcatctgcttcctcaaaattagctgctgacatgcaacgtttttctagg
cctgagcgacgcattaatggtcctacaatatctcatttgtggtctatgttgaagttgctt
gatgttttggtgcaacttgatcatcttaaaaatgctaaggctagcatacctaatgacttt
tcatggtataaaaggactttcacacaagtcagtggtcagtggcaagacactgattcaatg
agggaggaattagatgatttgcagattttcttgagcacaagatgggctattttgttgaat
ttgcatgttgagatgttccgtgtgaacaatgtagaagacattcttcaagttcttatagtc
tttgttgtagagtctttagaattggactttgcacttctctttccagagcgccacattctt
ttgcgtgttttgcctgttcttgttgtcctagtgacatcatcagagaaagacagcgagtct
ctgtataagagggtgaaaatcaacagactgatcaatatatttaagaatgaagcagtcatt
cctgcatttccagatctgcatttgtctcctgctgcaatattgaaggaattatcaacatac
tttccaaaattttcttcccaaactcgtcttctcacccttccagcacctcatgagcttcca
cctcgtgaagcacaagaatatcagagacattatctgatcatcaatcatattggagccatc
cgtgctgagcatgatgattttgttattcgttttgcttctgcaatgaatcagctgttactg
ttgaagtcaactgatggttctgatgttgaatggagcaaagaagtcaaggggaacatgtat
gatatgattgttgaaggttttcagctattaagcagatggactgcacgcatatgggaacaa
tgtgcttggaaattttctcgaccatgcaaagatgcatccccatcattctctgactatgaa
aaggtagtacgatataattacagtgcagaggaaaggaaagcactggttgaacttgtgagc
tacataaagagtgttggatctatgatgcagcggtgtgatacactggttgctgatgcttta
tgggaaacaatacattctgaggtacaagattttgtccaaaacacattagctactatgttg
cggactaccttcagaaagaagaaggacctctctaggattctttcagatatgcggaccctt
tcagctgattggatggctaatacaaacaagtcagaatctgagttacagtcctctcagcat
ggaggtgaagaaagcaaagcaaacatattttatccaagagcagttgccccaactgctgct
caggtgcactgcttgcagttcttaatatatgaggtggtttctggtggtaaccttaggagg
ccaggtggactcttcggcaatagtggctcagaaatcccagttaatgatttaaaacagctg
gagacatttttttacaagcttggttttttccttcatattttagactactcagcgactgtc
gcaacattgacagatcttggtttcttatggtttagagaattctatttagagtcttcacga
gtcattcagtttccaattgaatgctctcttccctggatgttggtggattgtgtacttgag
tcaccaaattctggtcttctcgagagtgttctgatgccatttgacatctataatgattca
gctcagcaagccttggtgttgctgaagcaacgatttctatacgatgaaattgaggctgag
gtggatcattgttttgatatatttgttacaaaattgtgtgaaaccattttcacatattac
aaaagttgggcggcaagtgaattgcttgatccttccttcctctttgcttcagacaatgca
gaaaagtatgctgtgcaacccataaggctcaatatgctgcttaaaataactagagtgaag
ctgcttggaaggatgattaatttgcgaagtttgatcactgaatggatgaacaaggttttc
cgtgaaaatattgagtttctatttggtcgttttgagtgtcaggatctgtgtgccatagtg
gaattagagaagctgttggatgtcttaaaacattcacatgaactactgtctagagatctt
tctgtagactcttttagtctcatgttgaacgagatgcaagagaacatttcccttgtatca
ttttctagtcgacttgcctcacagatttggtctgagatgcaaagtgattttttgccaaat
ttcattctctgcaatactactcaacgttttatcagatcatcaaggactgttcctgttcaa
aagccatcagtaccctctgtgaagcctagtttctattgtggtactcaagatttgaattct
gcccatcaaagttttgcacgactgcatagtggattctttggaatacctcacatgttttct
gttgttcgacttctgggatcccgatcattaccttggcttattagagcccttcttgatcac
atatcaaacaagattactttgcttgaaccaatgattacaggattacaagactctttgcca
aaatcaattgggcttcttccttttgatggaggtgtgacaggttgcgtgagactcgttaag
gagcatcttaactgggagacaaaatcagagctgaaagctgaggttcttcatggcataaaa
gagattggaagtgtattatattggatggggcttctagatattgtgttgagagaaaaggat
tctatggatttcatgcaaactgctccctggctgggcttgcttcctggagcagatggtcaa
atagcaacttctcaagatggtggagacagccctgttgttagtttgtttaaatcaacagct
gctgcaatggtttcataccctggttgtccatcacccacctctttccacattatgtcaaaa
caagcagaagctgcagatcttttatacaaggctaacttgaacactggaagtgtgctggag
tatgcacttgctttcactagtgctgcgttggacaagtattgtaataaatggagtgctgca
cccaaaacaggcttcattgacattacaatttctaaagatttctatcgaatttacagtggt
ctccaaattggatacttggaagagtctgcccaagtgccatcaaatagtcatgaaaggctg
ggagattcagttgcttgggggggatgcactataatttatttgcttgggcagcagctgcat
tttgagctctttgacttttcatatcagatcctcaatatcgcagaagtggaggctgcatct
gttatgcaaacacataagaactcacaattttctgtgaagggatgggaagccttattggaa
gcaatgaaaaaagcaaggagattaaataaccatgtattttctatgcttaaagcacgttgc
ccccttgaagaaaagacagcttgcgctattaagcaaagtggtgctccaatacatcgtata
aaatttgataacacagtttcagcatttgaaacactgccgcagaaaggttcttaa
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