Glycine max (soybean): 100814679
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Entry
100814679 CDS
T01710
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100814679
Enzymes [BR:
gmx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
100814679
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
100814679
NCBI-ProteinID:
XP_003523121
UniProt:
I1JXE5
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Position
4:complement(44994373..44996857)
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AA seq
408 aa
AA seq
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MTSTLLSLLFLLFSLLTPTLISSSPVLNPQEVVQEVNKKINGSIARPRRNLGYLSCGSGN
PIDDCWRCDPNWEQNRQRLADCAIGFGKNAIGGRDGKIYVVEDDGDDDAVNPKPGTLRHA
VIQDEPLWIIFARDMVIQLKEELLMNSFKTIDGRGASVHVAGGPCITIQYVTNVIIHGIH
IHDCKQGGNAMVRDSPRHYGWRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGST
AITISNNYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRLGYFHVVNN
DYTHWEMYAIGGSANPTINCQGNRFVAPDDRFSKEVTKREDTPESEWQDWNWRSEGDLLV
NGAFFTASGAGASSSYARASSLSARPSSLVGSITTGAGALSCKKGSPC
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcactcttctgtctttgctcttcttgctcttctctcttctcactccaactcta
atttcctcttcaccagttctaaaccctcaagaggtcgtacaagaggtcaacaagaaaatc
aatggctctatagcaagacccagaaggaacttgggctacctctcatgtggtagtggcaac
cccatcgatgattgttggaggtgtgaccccaactgggagcagaacaggcagaggctagca
gactgcgcaatcgggttcggcaagaacgccattggcggcagagacggcaagatctatgtg
gtggaggacgacggcgacgacgacgcggtgaacccgaagccgggaaccctccggcacgcc
gtgatccaagacgagcccttatggataatcttcgccagagacatggtgatccaacttaaa
gaagagcttctcatgaactccttcaagaccatcgacggaagaggtgccagcgtgcacgtt
gctgggggtccatgcataacgatacagtacgtgaccaacgtcatcatccatgggattcac
atacacgattgcaagcagggagggaacgctatggtgcgggactccccacggcactacggc
tggagaaccgtatcggacggtgacggcgtgtccatcttcggagggagccacgtgtgggtt
gaccattgctcgctgtctaactgcaacgacgggttgatcgacgccatccatggctccacc
gctattaccatttctaataactacatgacccatcatgataaggtcatgttgttgggtcac
agcgattcttacacccaggacaaggacatgcaagtcactattgctttcaaccactttggt
gaaggccttgttcaaaggatgccaaggtgtaggcttgggtatttccatgtggtgaacaat
gattatactcactgggaaatgtatgccattggtggaagtgccaatccaaccatcaactgc
caaggcaacagatttgttgcacccgatgacagattcagcaaagaggtgacaaaacgtgaa
gataccccagagagtgagtggcaggattggaattggaggtcagaaggggacttgttagta
aacggtgcctttttcacagcatcgggtgctggagcctcctctagctatgcaagggcttct
agcttaagtgcaagaccatcttcccttgttggttccataacaacaggtgctggtgcactc
agttgtaagaaaggttctccttgctga
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