Glycine max (soybean): 100815140
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Entry
100815140 CDS
T01710
Name
(RefSeq) exosome complex exonuclease RRP46 homolog
KO
K12590
exosome complex component RRP46
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100815140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100815140
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100815140
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100815140
NCBI-ProteinID:
XP_003534569
UniProt:
K7LG67
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All DBs
Position
9:complement(48305844..48310171)
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AA seq
243 aa
AA seq
DB search
METDRPDGRTPNQLRPLACSCSILHRAHGSASWAQGETKVLAAVYGPKAGTKKNENPEKA
SIEVIWKPKTGQIGKLEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPCAI
NAACTALVDAGIPLKHLAVAICCSVTDSGCIILDPTKEEEEKMKAYINLVFPNTIVSVLP
ERSSQVGSEPMAHGIMTSVTQGAMSVDDYLHCLDRGRAASARLSEFVRKNIGPKSTCEAS
KAG
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggagactgacagacctgacggccggactcccaatcaactgagacccctggcctgctcc
tgctctatcctgcatcgcgcccatggctcggccagttgggctcaaggagaaaccaaagtg
cttgctgccgtttatggacccaaggcggggaccaagaagaatgaaaaccccgaaaaagca
tctattgaagttatttggaaacccaagactggacaaattggaaaattggagaaggagtat
gagatgatattgaagagaactttggagagcatttgcattcgaacgatatatcccaacacc
accacttcggttatagtccaggttgtacacgatgatggtgctcttcttccatgtgcaata
aatgcagcatgcactgcacttgtggatgctggaatacccctaaaacatcttgctgtggcg
atatgttgttctgtaacagatagtggctgtattatattggacccaaccaaagaggaagag
gagaaaatgaaagcatacatcaatttagtttttccaaatacaattgtttcagtcctccca
gagagatcatcgcaggtgggtagtgagcctatggcacatggaatcatgacatctgttaca
cagggtgctatgtcagtggatgattatcttcactgcctagatcgagggcgtgctgctagt
gcaagattgtcggaatttgtgaggaagaacatagggccgaaatctacatgtgaggcatct
aaagccgggtga
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