Glycine max (soybean): 100815329
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Entry
100815329 CDS
T01710
Name
(RefSeq) protein RRP6-like 2
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100815329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100815329
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
100815329
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Ortholog
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
RRP7
Motif
Other DBs
NCBI-GeneID:
100815329
NCBI-ProteinID:
XP_003551099
UniProt:
I1MW66
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All DBs
Position
17:complement(24093346..24104566)
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AA seq
889 aa
AA seq
DB search
MNVDHDQPPSATKAQALQTLTAGPLSSSVAKLAASSRCIPSDKDFHFYRNFEEFKVPVEE
IARESRSMLEAIGAAAAHAAFPDNDVDDDAAYDWLVNANDDVLERFDASVDEFRKVRQEE
EETGRPAMHPMEEDGFQLVTGKKKKGGKGNVTPAATGSEVAAVAPPGVTVATKDKKTMGP
KSKVPFHIPTIRRPQDEYNIVVNNANMPFEHVWLQRSDDGLSFIHPLEKLSVLNFVDTNL
GDVVPVKPPSIESTPFKLVEEVKDLKELAAKLRSVNEFAVDLEHNQYRSFQGLTCLMQIS
TRTEDFIVDTLKLRIHIGPYLREIFKDPAKRKVMHGADRDIAWLQRDFGIYICNLFDTHQ
ASKLLNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPDEMIRYAREDTHYLLYIYDLM
RIKLFALSKESESSESSDTPLVEVYKRSYDVCIQLYEKELLTENSYLHIYGLQGAGFNAQ
QLAIVSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEHN
LDTVVSIIRHSIQNAASFEEAAQQLKEAQAVTASDVVPVTDGTEDPPSHTRHSKESSQHQ
ATSVPIKIKSNSLIFEPPKDSLTIAEQNRDANVGALSTAKGNGAAVQVLKKPTGAFGALL
GSSASKRKLGPGKGKEEIKLEQIRSSVSLPFHSFLGSSEKSEPTEEIPSVASEMSEPQKP
VSDVVSASPVDEIIMLESDTGAKDMEQNNLENSNEHREKDSVVSTSGKEDEDEPVSLSEL
SSNLKKCFHSNDQNNKIRQPKKTEQPSGLVQLKPFDYEAARKHVKFGEHKKHASSKGSDG
HMEVVEDSGSKKQRSTTGQGQASDLSKQLPQGRRRQAFPASGNRSSTFR
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggatcacgatcagcctccctcggcgacgaaggcccaggcgctgcagacccta
acggcgggtcctctatcgtcgtcggtggcgaagctcgctgcgtcctcgcggtgcatccct
tccgacaaggacttccacttctaccgcaacttcgaggagttcaaggtccccgtcgaggaa
atcgctcgggagtcgcggtcgatgctcgaggccatcggcgctgcggcagcgcatgcggcg
ttccctgacaacgacgtcgacgacgacgccgcatacgactggctggtaaacgcgaatgac
gacgttttggagcggttcgacgcgtcggtggacgagttccggaaggttcggcaggaggaa
gaggagactgggcgtccggcgatgcatccgatggaggaagatgggtttcaattggtgacg
gggaagaagaagaaaggggggaaagggaatgtgactccggcagcgacgggttctgaggtg
gcggcagtggcgccaccgggagttacggtggcaactaaggataagaagacgatggggccg
aagtcgaaggttccgtttcatataccaacgattaggaggccgcaggatgagtataatata
gtggttaataatgcaaacatgccgtttgagcatgtttggttgcagaggagtgatgatggg
ttgagcttcattcatccactggaaaagctatctgttttgaattttgttgatacaaatctt
ggggatgttgtgcctgtgaagcctccctcgatagaaagcaccccttttaagctcgttgag
gaagtcaaagatttaaaggagttggcggctaagctgcgttctgttaatgagtttgctgtt
gatttggaacataatcaatatcggtctttccaaggtttgacttgcctgatgcaaatttca
acaaggactgaagattttattgttgacacattgaaacttcgcattcatattggaccctat
ctaagggaaatcttcaaggaccctgccaagaggaaggtcatgcatggtgcggatcgagat
attgcatggcttcaacgagactttggaatttacatttgtaatttgtttgacactcaccag
gcttcaaagttgttaaacttggagagaaatagtttggagcatattctacatcatttttgt
gaagttactgcaaacaaagaataccagaatgcagactggagactacgtccacttcctgat
gagatgataagatatgccagagaagatacacactatctgttgtatatatacgacttaatg
aggattaagttatttgccttgtctaaggagtctgaaagttctgagtcttcagacactcct
ctggtggaggtctacaaacgcagttatgatgtctgcattcagctatatgagaaagaactt
ttgacagagaactcctatcttcatatatatgggttgcaaggggccggtttcaatgctcag
cagcttgccattgtttctgggctgtgtgaatggagggacattgttgcccgtgcagaggat
gaaagtacaggatatgtattgccaaataaatctgttcttgaaatcgctaagcagatgcct
cttactacaagcaagctacggcgattggtgaagtcaaaacacccttatgttgaacacaat
cttgatactgttgtcagcatcattaggcattcaatccagaatgctgcttcatttgaggaa
gctgctcaacagttgaaagaagcacaagctgtcactgcatcagatgtagtacctgttaca
gatggaactgaagatcccccatctcatacacggcattctaaggaatcttctcagcatcaa
gctacaagtgtaccaataaaaattaagtccaatagtcttatttttgagccaccaaaggat
agtctcacaattgcagagcagaatagggatgcaaatgttggtgcactttctacagcaaag
gggaatggagcagctgttcaggtgcttaaaaagcctactggtgcttttggggcactcctg
gggagttctgcttcaaagaggaagcttggtcctggtaagggcaaggaagagatcaagcta
gagcagattagatcttctgtcagtcttcctttccattcatttttgggtagcagtgaaaag
tcagaacctacagaagaaattcctagtgtagcatctgaaatgtcagaaccgcagaaacct
gtttctgatgtagtttctgcctctccagtagatgagattataatgctagaatcagatacg
ggtgcaaaggatatggagcagaataacctagaaaactccaatgaacacagggagaaagat
tctgttgtgtccacttcgggaaaagaggatgaagatgagccagtatcactgtcagaattg
tcatcgaatttaaaaaaatgctttcattcaaatgatcaaaataataaaatcagacagccc
aagaaaactgaacagcccagtggcttagtgcagctgaagccatttgattatgaagctgca
aggaaacatgttaagtttggagaacataaaaagcatgcatcttccaagggttccgatggt
catatggaggtagtagaggactccggtagcaagaagcagcgttcgacaacaggacaggga
caagctagtgatttgagtaaacaattgccacaaggtagaagacgtcaggcgtttcctgct
tctgggaatcgtagttcaacattccgctga
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