Glycine max (soybean): 100815428
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Entry
100815428 CDS
T01710
Name
(RefSeq) cryptochrome-1-like
KO
K12118
cryptochrome 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
100815428
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GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
100815428
NCBI-ProteinID:
NP_001242152
UniProt:
D0FZ16
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Position
13:19395679..19401381
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AA seq
681 aa
AA seq
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MSGGGCSIVWFRRDLRVEDNPALAAGVRAGAVISVFIWAPEEEGQYYPGRVSRWWLKQSL
AHLDSSLRNLGSPLITKRSTNSISSLLEVVKSTGATQLFFNHLYDPLSLVRDHRAKEVLT
AQGITVRSFNSDLLYEPWDVNDAHGQPFTTFSAFWERCLSMPYDPQAPLLPPKRIIPGDV
PRCPSDTLVFEDELEKASNALLARAWSPGWSNADKALTAFVNGALIEYSKNRRKADSATT
SFLSPHLHFGEVSVKKVFHLVRIKQVFWANEGNKAGEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLAHLKFFPWVVNEGYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRELDRIDNPQFEGYKCD
PNGEYVRRWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAEVRLQEA
LIQMWQQEAASRAAMENGTEEGLGDSAESAPIAFPQDIQMEERPEPVRNNLPHGTRRYQD
QMVPSITSSHVRVEEEETSSDLRNSAADSRAEVPINVTTQQIARETVNQGVLLNANRNTR
VQNNATTWLRNAAEDSTAESSSSTRRERDGGVVPVWSPPASNFSEQFVDDENGIGAGSSY
LQRQHPQSHQLMNWTRLPQTG
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtggtggatgcagcatagtgtggttcaggagagatctgagggtggaggataac
cctgcactggctgcaggagtgagagcaggtgctgtgatttctgtcttcatttgggctcct
gaggaagaaggtcaatactaccctggaagggtctctaggtggtggctcaaacaaagcttg
gctcaccttgattcctctctgagaaaccttggctcccctttaatcaccaaacgttccact
aatagtatttcttctctcttggaggttgttaagtccactggggctacccaactctttttc
aaccatttatatgatccattgtcacttgtgagggatcacagagcaaaggaggttctgacg
gctcaaggcattaccgtacgttccttcaactcggacttgttgtatgagccatgggatgtg
aatgatgctcatggccaaccattcacaactttttctgctttttgggaaagatgccttagc
atgccttatgacccacaagcacctcttctcccacctaaaaggattattccaggtgatgta
ccaaggtgtccttctgatacattggtgtttgaagacgaattggagaaggcaagcaatgcg
cttcttgctcgagcatggtcaccggggtggagcaatgcagacaaggcattgacagcattc
gtaaacggtgctttgatcgaatactcgaagaatcgcaggaaggcagacagtgccacaacc
tcatttctctcaccacatttgcactttggtgaggtgagtgtgaagaaagttttccacctt
gtccgcatcaagcaagtgttttgggccaatgaaggaaacaaggctggtgaagagagtgtg
aacttgtttctcaagtctattggcctcagagagtattcgagatacattagtttcaaccac
ccttatagtcatgagaggccccttctagcccaccttaagtttttcccttgggtggtgaat
gaaggatactttaaggcttggagacaaggcagaacagggtaccctttggtggatgctgga
atgagagagttgtgggcaactggttggttgcatgatcggatacgcgttgtggtttcaagt
ttcttcgtgaaggtgctgcagcttccttggagatggggaatgaagtatttctgggacacc
cttttggatgcagatcttgagagtgatgctcttggttggcagtacatatctggcactctc
cctgatggtcgtgaacttgaccgaatagataatccacagtttgaggggtacaaatgtgac
ccaaatggagaatatgtgcgacgatggcttcctgaacttgctagattaccaactgaatgg
atacaccatccatggaatgcaccggagtctgtactccaagctgctggaattgaacttggt
tcaaattatcctcttcccattgtgggaatagatgcagcagaagtaagacttcaagaagca
cttattcaaatgtggcaacaagaagcagcttcaagagctgcaatggaaaatggaaccgag
gaagggcttggagactcagctgaatcagcccctattgcctttcctcaagacatacaaatg
gaggaaaggcctgaacctgttaggaacaacctgcctcatggtactcggcgctaccaggat
cagatggtcccaagtatcacatcttcccatgtgagagttgaagaggaagaaacatcttca
gaccttcgaaactcggctgcagacagcagggccgaagtgcctataaatgtgaccacacaa
caaattgcaagagagacagtgaatcaaggggtgttactgaatgcaaacagaaacactcga
gtacagaataatgctactacgtggctgagaaatgcagctgaagattccacagcagaatct
tcaagtagtactaggagagaaagggatgggggtgtagttccagtatggtctcccccagct
tctaacttctcagaacaatttgtagatgatgaaaatggtataggagccggttcatcttac
ttgcaaaggcagcatcctcagtctcatcaattgatgaactggacacggctacctcagaca
gggtaa
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