Glycine max (soybean): 100815919
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Entry
100815919 CDS
T01710
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100815919
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100815919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
DNA_primase_S
AAA_27
Motif
Other DBs
NCBI-GeneID:
100815919
NCBI-ProteinID:
XP_003538746
UniProt:
K7LMU8
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Position
11:2508778..2518768
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AA seq
794 aa
AA seq
DB search
MEDDGGESSSFVVGIIENRAKEVGLAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPI
VIIIPPNKLASNSTAGVTELVDRFYGSVKQVMLARGCFDDTKGAILIKNLAAKEPSALGL
DTYYKQYYLCLAAAAATLKWTEAEKGVVVTNHSLSVTFNGSFDHMNIDSTSIQNLEIIEP
FHSTLLGTSNKKRSLFHMLKTTKTIGGSRLLRANLLQPLKDIETINARLDCLDELMSNEQ
LFFGLCQILRKFPKETDRVLCHFCFKAKKVTAEALAVDRAKKSQVLVSSVILLKTALDAL
PLLSKVLKDVKSSLLSNIYKSVCENEKYDLIRKRIGEVIDEDVLHARVPFVACTQQCFAV
KAGIDGLLDISRRAFCETSEAIHNLANNYREDFKLPNLKLTYKNRQGFHFVIPQKNIQGK
LPSKFIQVVKHGNNIRCSSLELASLNARNKSAAAECYTRTEVCLEELMDDIRENVSVLTL
LAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFTENGPLAIDSGRHPILESIHNDFVANNI
FLTEASNMAIVMGPNMSGKSTYLQQVCLIVILAQVGCYVPARFSTVRVVDRMFTRMGAVD
NLESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGFAIAWSCCEHLLSLKTY
TVFATHMENISELVTMYPNVKILHFDVELKNNHLDFKFQLKEGSKRIPHYGLLLAEVAGL
PSSVVETARMITSRISEKEVKRMEVNCLQHHSIQKAYHVAQRLLCLKYCNQDEDTIRQAL
RNLKESCIKEKLLS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggtggagagagttcgagcttcgtggtcggtatcatcgaaaacagagcc
aaagaggttggattagctgcttttgatttgaggtcagcttcactgcatctttctcaatat
attgaaactagcagctcatatcaaaacacaaagacgctactgcatttctacgatcccatt
gtgatcattattcctccaaacaagttagcatccaattccacggctggagttacagaattg
gttgatagattttatggttcagtgaagcaggtaatgctggcccggggttgttttgatgac
acaaagggtgctatcttaataaaaaaccttgctgccaaggaaccttcagcacttggtttg
gacacttactataagcagtattatctctgcctggctgctgctgctgccactttaaagtgg
acggaagcagaaaaaggggttgttgttaccaatcactcattgtcggtcaccttcaatgga
tcatttgatcacatgaatattgattcaacaagcatccaaaatttggaaattattgagcca
tttcattctaccctacttggaacaagcaacaaaaagagaagtttgtttcacatgctcaag
acaacaaaaactattggagggagtagactactccgtgccaatctgttgcagcctctaaag
gacattgagacaatcaatgctcgtcttgattgcctagatgaattgatgagcaacgaacaa
ctattttttggcctctgtcagattttgcgtaaatttccgaaagagactgatagagtatta
tgtcacttctgctttaaggcaaagaaagttacagctgaggccttggcagttgatcgagct
aaaaagagtcaagtgctagtttctagtgtaatcctccttaagactgccttggatgccctt
cctttactatctaaggttcttaaggacgtgaaaagttcccttctttcaaatatctacaag
tcagtttgtgaaaatgagaaatatgatcttattaggaaaaggataggggaggttattgat
gaagatgtacttcatgcacgcgttccttttgttgcctgcactcaacaatgctttgctgtt
aaggctggaattgatggcctcttggatatttcacgaagagcattttgtgaaaccagtgaa
gccatccacaatcttgcaaacaattatcgagaggattttaagttgcccaatttaaagctt
acctataaaaacaggcagggattccactttgttataccacagaagaatattcaaggaaag
cttccaagcaagttcattcaggttgtaaaacatgggaacaacattcgttgctcaagttta
gaactagcatctttgaacgctaggaataaatctgcagccgcagaatgctatacaagaaca
gaggtttgtctggaagaacttatggatgacattcgtgagaatgtctctgtgttgacactg
cttgctgaggtcttgtgtttgctggatatgattgtaaattcatttgctcatatgatatca
actaagcctgttgatcgatatacaagaccagaatttacagagaatgggccgttggcaatt
gattctggtagacacccaatcctggagagcatacacaatgacttcgttgccaataatata
tttctgactgaagcctcgaatatggcgattgtgatgggccccaatatgagtggaaagagt
acttaccttcaacaagtgtgtctcatagttattcttgctcaagttgggtgttatgttcct
gctcgtttctcaactgtgagggtagttgatcgtatgtttacaaggatgggtgcagttgat
aatcttgaatccaactctagcacgttcatgacggagatgaaagaaacagcttttatcatg
cagaatgtttcacaaaggagtctgattgttatggatgaacttgggagggctacttcatca
tctgatggatttgcaattgcgtggagttgctgcgagcatcttttgtcacttaaaacgtat
accgtatttgccactcatatggagaacatatcggaattagtaacaatgtatcccaacgtg
aaaattcttcactttgatgtcgagttaaaaaacaaccacttggacttcaagtttcaactt
aaggaaggatcgaaacgcatcccccattatggccttctcttagcagaagtggcaggatta
ccaagttcggttgttgagacagccagaatgatcacatctaggatttcagaaaaggaagtt
aagaggatggaagtcaactgtttacagcatcattcaatacaaaaggcatatcatgttgca
cagcgcttgctatgcctgaaatactgcaatcaagatgaggatacgattcggcaagctttg
cgtaatcttaaggaaagctgcatcaaggaaaagcttttaagttga
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