Glycine max (soybean): 100816115
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Entry
100816115 CDS
T01710
Name
(RefSeq) THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100816115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100816115
03041 Spliceosome [BR:
gmx03041
]
100816115
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100816115
Spliceosome [BR:
gmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100816115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
100816115
NCBI-ProteinID:
XP_003523934
UniProt:
I1JTK1
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Position
4:complement(3107223..3112747)
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AA seq
802 aa
AA seq
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MEDGEIEEGSIGGVEEEEQSPEPHKSEESPYQMLRNSKASVQNIVADMLSIKKEGKPKQL
LRDLVTQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKSHYVKA
IKACKDFKSKYPDIDLVPEEDFFRDAPQDIQDCFLSNDAAHNLMLRRLNFELFQRKELCK
LHEKLEQQKKILLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAEL
LPPALYVIYSQLLAQKEAFGEPIDLEIIGSLKDAQAFARQQAHKDTDISTTVESSKLEDD
APDEEEDGQRRRKRPRRVQAKESLDQGGIYQVHPLKIIIHVYEDEASGPKSAKLITLRFE
YLVKLNVVCVGIEGSNDAPENDLLCNLFPNDTGLELPHQSAKLFVQDAITFNTQRTSRPY
RWAQHLAGIDFLPEMSPLLLTDNSGAAKNENVISGLSLYRQQNRVPTVLQRIRARRKAQL
ALLEQLESLTKLEWPRLPCKSVPWALHTPLCNLDSWSPVKLPPVPRESSSPAVIDKEEHI
QEAMDADVIERSGATKAEPESITEDGELPTLLPKVSKLGLSAQLNLISKSIVPPLNKIRS
QSFKKIDDSSDFLLDTESDLDEPAQIEQEHEKSNYHARKSVSWMNYGLKEFHLVICRKIG
TDESNLNLEAKIQISMEYPLRPPLFLLSISCISSGENHDETGLEWYNELRAMEAEVNLHL
LKMLTVNQKNFVLAHQVSCLAMLFDYYLDEASPSSERTNCTSVVDVGLCKPVSGRFLGRS
FRGRDRRKMISWKDMKLNSSCI
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtgagattgaagagggatcaataggcggtgtagaggaagaggaacaatca
ccagagcctcacaagtcggaggaatcgccctaccaaatgttgcgcaacagcaaggcctcc
gtacagaacattgtcgccgatatgctctccattaaaaaagagggtaaacccaagcaacta
cttcgagatctcgttactcagatgttcctacatttcatcactctccgccaggcaaatcgc
agtattttgctggaggaagaccgcgtgaaaaccgaaacggagcgtgccaaggcgccggtg
gatttcaccacgctgcagcttcacaacctcatgtacgagaaaagccactacgttaaggcg
atcaaggcctgcaaagacttcaagtccaaatatcctgacattgaccttgttcctgaggag
gactttttccgcgacgctcctcaagatatccaggactgcttcttgtccaacgacgccgcg
cacaatctcatgctcagaaggctcaatttcgagctattccagcgcaaagaactctgcaaa
cttcatgagaaattggaacaacaaaagaaaatccttttggagactattgcaaaccgaaag
aagttcctgaccagtctcccttcacatctaaagtctctcaagaaagcctccttgcctgta
caaaaccagctagggcttcatcatacaaagagattaaagcagcatcattcagcagagttg
cttcctccagctctttatgtgatttactcacagctgttggctcaaaaggaggcctttgga
gaacccattgatctggagattataggaagcctgaaggatgctcaagcttttgctcgtcaa
caagctcacaaggacactgacatttccactaccgtggagagttccaaattggaagatgat
gctcctgatgaagaagaagatggtcagagacggagaaaaaggccaaggagggttcaagcc
aaggagagccttgaccaggggggaatatatcaagttcacccactaaaaatcattatccat
gtgtatgaagatgaggcttcgggtcctaaatctgcaaaactcattactctaaggttcgag
tacttggtgaagttgaatgttgtatgtgttggaatagaaggatctaatgatgctccagag
aatgacctcttatgcaatttattccctaatgatacgggacttgagcttcctcaccagtca
gccaaactctttgttcaagatgctataacattcaatactcaaagaacctcacgtccttat
agatgggctcagcacctggcagggattgatttcttgcctgagatgtctcccttgcttctt
actgacaacagtggagcagccaagaatgaaaatgttatatctggtctttcactatatcgc
cagcagaaccgagtaccgacagttctgcagagaattcgtgcaagaagaaaagctcaattg
gcccttctggaacagctagaatctctcactaagctagagtggcctcgtttgccctgcaaa
agtgttccatgggctttacacactcctttgtgcaatttggacagttggtcacctgtaaaa
cttccacctgtacctagagagtcctcatctcctgctgtcatagataaagaagagcatatt
caggaagcaatggatgctgatgtaattgaacgatctggtgccacaaaagcagaaccagag
agtataacagaagatggggagcttccaacgttgcttcctaaagtgtctaagcttggcctt
tccgcacaactgaacttaatttcaaaaagtatcgttcctccactcaataaaatcaggtca
caaagtttcaaaaagattgatgatagttctgatttcttgctggatactgaaagtgatctt
gatgagccggcacagattgaacaagaacatgaaaaatccaattatcatgccagaaagtct
gtttcatggatgaattacgggctcaaggaatttcacttagttatttgcagaaaaatcggt
acagatgagagcaatttgaatttagaagccaagatccagatcagtatggaatatcctcta
aggcctcctctttttctattgagcattagttgtatatcgtctggggaaaaccatgatgag
acaggattggagtggtacaatgaacttcgtgcaatggaagcagaggtcaatctacactta
ctaaagatgttaactgtcaatcaaaaaaattttgtattggctcatcaagtgagttgtctt
gctatgttgtttgactattatttggatgaggcatccccatcatctgaaaggacaaattgt
acttccgtggttgatgttggcttatgcaagcctgtttctggtagattcctgggtagatct
tttagaggaagggatcgcaggaagatgatctcatggaaagacatgaaacttaattccagc
tgtatctaa
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