KEGG   Glycine max (soybean): 100816115
Entry
100816115         CDS       T01710                                 
Name
(RefSeq) THO complex subunit 5A
  KO
K13174  THO complex subunit 5
Organism
gmx  Glycine max (soybean)
Pathway
gmx03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100816115
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100816115
   03041 Spliceosome [BR:gmx03041]
    100816115
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100816115
Spliceosome [BR:gmx03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100816115
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 100816115
NCBI-ProteinID: XP_003523934
UniProt: I1JTK1
LinkDB
Position
4:complement(3107223..3112747)
AA seq 802 aa
MEDGEIEEGSIGGVEEEEQSPEPHKSEESPYQMLRNSKASVQNIVADMLSIKKEGKPKQL
LRDLVTQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKSHYVKA
IKACKDFKSKYPDIDLVPEEDFFRDAPQDIQDCFLSNDAAHNLMLRRLNFELFQRKELCK
LHEKLEQQKKILLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAEL
LPPALYVIYSQLLAQKEAFGEPIDLEIIGSLKDAQAFARQQAHKDTDISTTVESSKLEDD
APDEEEDGQRRRKRPRRVQAKESLDQGGIYQVHPLKIIIHVYEDEASGPKSAKLITLRFE
YLVKLNVVCVGIEGSNDAPENDLLCNLFPNDTGLELPHQSAKLFVQDAITFNTQRTSRPY
RWAQHLAGIDFLPEMSPLLLTDNSGAAKNENVISGLSLYRQQNRVPTVLQRIRARRKAQL
ALLEQLESLTKLEWPRLPCKSVPWALHTPLCNLDSWSPVKLPPVPRESSSPAVIDKEEHI
QEAMDADVIERSGATKAEPESITEDGELPTLLPKVSKLGLSAQLNLISKSIVPPLNKIRS
QSFKKIDDSSDFLLDTESDLDEPAQIEQEHEKSNYHARKSVSWMNYGLKEFHLVICRKIG
TDESNLNLEAKIQISMEYPLRPPLFLLSISCISSGENHDETGLEWYNELRAMEAEVNLHL
LKMLTVNQKNFVLAHQVSCLAMLFDYYLDEASPSSERTNCTSVVDVGLCKPVSGRFLGRS
FRGRDRRKMISWKDMKLNSSCI
NT seq 2409 nt   +upstreamnt  +downstreamnt
atggaagacggtgagattgaagagggatcaataggcggtgtagaggaagaggaacaatca
ccagagcctcacaagtcggaggaatcgccctaccaaatgttgcgcaacagcaaggcctcc
gtacagaacattgtcgccgatatgctctccattaaaaaagagggtaaacccaagcaacta
cttcgagatctcgttactcagatgttcctacatttcatcactctccgccaggcaaatcgc
agtattttgctggaggaagaccgcgtgaaaaccgaaacggagcgtgccaaggcgccggtg
gatttcaccacgctgcagcttcacaacctcatgtacgagaaaagccactacgttaaggcg
atcaaggcctgcaaagacttcaagtccaaatatcctgacattgaccttgttcctgaggag
gactttttccgcgacgctcctcaagatatccaggactgcttcttgtccaacgacgccgcg
cacaatctcatgctcagaaggctcaatttcgagctattccagcgcaaagaactctgcaaa
cttcatgagaaattggaacaacaaaagaaaatccttttggagactattgcaaaccgaaag
aagttcctgaccagtctcccttcacatctaaagtctctcaagaaagcctccttgcctgta
caaaaccagctagggcttcatcatacaaagagattaaagcagcatcattcagcagagttg
cttcctccagctctttatgtgatttactcacagctgttggctcaaaaggaggcctttgga
gaacccattgatctggagattataggaagcctgaaggatgctcaagcttttgctcgtcaa
caagctcacaaggacactgacatttccactaccgtggagagttccaaattggaagatgat
gctcctgatgaagaagaagatggtcagagacggagaaaaaggccaaggagggttcaagcc
aaggagagccttgaccaggggggaatatatcaagttcacccactaaaaatcattatccat
gtgtatgaagatgaggcttcgggtcctaaatctgcaaaactcattactctaaggttcgag
tacttggtgaagttgaatgttgtatgtgttggaatagaaggatctaatgatgctccagag
aatgacctcttatgcaatttattccctaatgatacgggacttgagcttcctcaccagtca
gccaaactctttgttcaagatgctataacattcaatactcaaagaacctcacgtccttat
agatgggctcagcacctggcagggattgatttcttgcctgagatgtctcccttgcttctt
actgacaacagtggagcagccaagaatgaaaatgttatatctggtctttcactatatcgc
cagcagaaccgagtaccgacagttctgcagagaattcgtgcaagaagaaaagctcaattg
gcccttctggaacagctagaatctctcactaagctagagtggcctcgtttgccctgcaaa
agtgttccatgggctttacacactcctttgtgcaatttggacagttggtcacctgtaaaa
cttccacctgtacctagagagtcctcatctcctgctgtcatagataaagaagagcatatt
caggaagcaatggatgctgatgtaattgaacgatctggtgccacaaaagcagaaccagag
agtataacagaagatggggagcttccaacgttgcttcctaaagtgtctaagcttggcctt
tccgcacaactgaacttaatttcaaaaagtatcgttcctccactcaataaaatcaggtca
caaagtttcaaaaagattgatgatagttctgatttcttgctggatactgaaagtgatctt
gatgagccggcacagattgaacaagaacatgaaaaatccaattatcatgccagaaagtct
gtttcatggatgaattacgggctcaaggaatttcacttagttatttgcagaaaaatcggt
acagatgagagcaatttgaatttagaagccaagatccagatcagtatggaatatcctcta
aggcctcctctttttctattgagcattagttgtatatcgtctggggaaaaccatgatgag
acaggattggagtggtacaatgaacttcgtgcaatggaagcagaggtcaatctacactta
ctaaagatgttaactgtcaatcaaaaaaattttgtattggctcatcaagtgagttgtctt
gctatgttgtttgactattatttggatgaggcatccccatcatctgaaaggacaaattgt
acttccgtggttgatgttggcttatgcaagcctgtttctggtagattcctgggtagatct
tttagaggaagggatcgcaggaagatgatctcatggaaagacatgaaacttaattccagc
tgtatctaa

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