Glycine max (soybean): 100816241
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Entry
100816241 CDS
T01710
Symbol
TIR1D
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1D
KO
K14485
transport inhibitor response 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100816241 (TIR1D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmx04121
]
100816241 (TIR1D)
Ubiquitin system [BR:
gmx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100816241 (TIR1D)
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
LRR_NXF1-5
F-box
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
100816241
NCBI-ProteinID:
NP_001345175
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Position
3:42788076..42794007
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AA seq
586 aa
AA seq
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MQKMAYTFSFPEEVLEHVFSFIWSERDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPL
MVIKRFPELRSIALKGKPHFADFNLVPEGWGGYVCPWIAAMARAFPCLEEIRLKRMVITD
ESLELIAKSFKNFKVLVLTSCEGFTADGLAAIASNCRNLRELDLQESEVEDLSGHWLSHF
PDSYTSLVSLNISCLNHEVSLSALERLLGRCRNLRTLRLNRAVPLDRLPNLLLRCPQLVE
LGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAVYPICSRLTSLNLSYA
IIQSSDLIKLISQCPNLLRLWVLDYIEDAGLYALAASCKDLRELRVFPSEPFGLEPNVSL
TEQGLVSVSEGCPKLQSVLYFCRQMSNAALHTIARNRPNLTRFRLCIIEPRTPDYLTLEP
LDSGFGAIVEQCKDLQRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSG
CDNLRKLEIRDCPFGDKALLANAEKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVID
ERGPPDSRPDDCPVEKLYIYRTVAGPRLDMPGFVWTMEDDSSLRLE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatggcgtacacgttttcgtttccggaggaggtgctggagcacgtgttctcg
ttcatatggagcgagagggacaggaacgcgatctcgctggtgtgcaagtcgtggtacgag
atcgagaggtggtgcaggaggaaggttttcgtggggaactgctacgcggtgagccctttg
atggtgatcaagcgcttcccggagctgagatccattgcgctcaaagggaagccgcacttc
gcggacttcaatttggtccccgagggttggggaggttacgtttgcccctggatcgccgcc
atggcccgggccttcccctgcctcgaagagatcaggctcaagaggatggtcatcaccgac
gagagcttggagctcatcgctaagtccttcaagaacttcaaggtcttggttctcacttcc
tgtgagggttttactgccgatggacttgccgccattgcttccaactgcaggaatctaagg
gaattggacttgcaggagagtgaagtggaggaccttagtgggcactggctaagccatttt
cctgattcctacacttcattagtttcacttaacatctcttgcttaaaccatgaggtgagt
ttatctgcattagagcgtctgcttgggaggtgtcggaacctgcggaccctccgtctcaat
cgtgccgtgccccttgatagactacccaacctacttctccggtgtcctcagctggttgag
ttaggcacaggagtctattcaactgagatgcgaccggaggtcttctcaaacctggaagca
gcattttctggttgcaagcagttgaagagcttgtctggcttttgggatgtgcttccatcc
taccttccagctgtctaccccatctgctccaggctaacatcgctaaacttgagttatgct
attattcaaagctctgatcttattaagcttatcagtcaatgcccaaatttgttgcgatta
tgggtgctggattacatagaagatgctggtctttatgcccttgctgcatcatgtaaggat
ctaagggagttaagggtgtttccgtctgagccgtttggtttagaaccaaatgtttcattg
acagaacagggccttgtctctgtgtctgaaggttgccccaagctccaatcggttctatat
ttttgtcgacaaatgtcgaatgcagccctacatacaattgcacggaacaggcctaatttg
actcgttttaggctttgtattattgagcctcgaactcctgactatctaaccctggaaccc
ctggattctggttttggagctattgtagagcaatgcaaggatcttcaacgcctatccctg
tctggtcttcttactgaccgtgtttttgagtatattgggacttatgcgaagaagctggag
atgctatctgtggcttttgctggagatagtgatttgggacttcaccatgtgctgtcaggg
tgtgataatcttaggaagctggagataagggattgcccctttggtgacaaggcccttttg
gcaaatgctgaaaagctggagacaatgcgatccctttggatgtcctcctgctcagtgagt
tatggagcgtgtaagctactgggtcagaaaatgcccagactcaacgttgaagtcattgat
gaaagaggacctccagattcaaggccagatgattgtcctgttgagaagctttatatatac
aggactgttgctgggccaaggttggacatgcctggttttgtgtggacaatggaagatgat
tcttcactaaggcttgagtga
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