Glycine max (soybean): 100816245
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Entry
100816245 CDS
T01710
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100816245
09122 Translation
03013 Nucleocytoplasmic transport
100816245
03015 mRNA surveillance pathway
100816245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100816245
03041 Spliceosome [BR:
gmx03041
]
100816245
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100816245
Spliceosome [BR:
gmx03041
]
Complex C
Other components
EJC/TREX
100816245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
100816245
NCBI-ProteinID:
XP_003537506
UniProt:
K7LRU6
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Position
11:complement(38068545..38072460)
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AA seq
705 aa
AA seq
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MSPKYQILHNRPINQWKVTELKDELKRRKISTKGLKDDLVKRLDEVLRLEREVDEASEKD
EANGFDGHADGKKVPEAVTVDAEMVDSTDRASAKTFDTAEKGKGGFVDPIETGNVEKIQE
IVDHDSDKNDKQDSVSNQVNINNSVSAMDQEVEPKGLPAGGDYANVGHEAIAHASTVETI
ITVTESVVTEVVASGEDTYRAEKNNEDSAAQLENEVSKAQLDGEDSKPQLDYDTKPLHED
PVPDSAVPENQVSEVNPSLGSQVKSDSISTDSLSINQKNELKDTIITDNVKLEQDIVKPE
MVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENINNVSSPDLNKTNSSDDVGYSEKL
NLDRSSGDDSMEEDLPETKQIDSKFNVDELKDKVEIEKPIVKEESSTIAVGDSLSAGKDD
THQDIDISPAALTEKRKFNEVGNSEPAKRQRRWNTETVKGPDAQSTTPRPATTPRDEPIT
LKRSFSRSDSSATDDTPKEHIVPPSQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSF
WMDQIKTHCYVTYSSVEEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPPTQA
ASDSTDRAVPPAPPFSQPEPSPHLHREQHPVPVILPPPPPLSKPPPVARERLPSPPPLPE
KVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVAAKLSTQGKSGRQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaaaatatcagattctccacaatcgccccatcaatcagtggaaggttacagag
ctgaaagatgagctgaagaggaggaagataagtaccaagggtttgaaggatgatttggtc
aaacgtttggacgaagtccttcgtctggaaagggaggttgatgaggcttctgagaaggat
gaggccaatggtttcgatggtcatgcagatgggaaaaaagttccggaagcagttactgtg
gatgctgaaatggttgattcaactgacagggccagtgccaaaacatttgatactgctgaa
aagggcaagggtggttttgttgatccaattgaaacgggaaatgtggaaaagattcaggag
attgtggatcatgacagcgataagaatgacaagcaggacagtgtttccaaccaagttaac
attaataatagtgtgtcagctatggatcaagaggttgaacctaagggcttgccagctggt
ggagattatgcaaatgtgggacatgaggcaattgcccatgcttctactgtggagactatc
attacggtcactgagagtgtagtaacagaagtagtggccagtggtgaggatacttatcgt
gccgaaaagaataatgaggattcagcagcacagctggagaatgaggtgtcaaaggcgcag
ctggatggtgaggactcaaagccccaactggattatgacaccaagcccttgcatgaggat
cctgttcccgactctgctgttccagaaaaccaggtatctgaggtcaaccctagtttaggg
tctcaagtaaaatctgattctatttctactgattctctgtcaattaatcaaaagaatgaa
ctaaaggatactataattactgataatgtcaaattagaacaagatattgttaagccggag
atggtggaagaaccatcatccagaaatgatgttcctgtttcttatgatgaatcacattca
atggatgttggagggctgcatgagaaaaaggcatctgttgaagaaaatatcaataatgtt
tcaagtccagacttgaacaagaccaatagcagtgatgatgtagggtattcagaaaagttg
aacttggacagaagttctggtgatgattctatggaagaggatttgcctgagactaagcaa
attgattctaagtttaatgttgatgaacttaaagacaaagtagagattgaaaagcctatt
gtgaaggaggaaagtagtactatagctgttggagatagtctatctgcaggaaaagatgat
acccaccaagatattgacattagtcctgctgccctgactgagaaacggaaatttaatgaa
gttgggaacagtgagcctgccaaaaggcaacgcaggtggaacactgaaacagttaaaggt
ccagatgcacaaagcactactcccaggcctgctactacacctagagatgagccaattact
ttgaaacgcagcttctctaggtctgattcctctgcaactgatgatacacctaaagaacac
attgttccaccatcacaaaggtccccaactaattccctcagaattgaccgtttcctccgt
ccatttaccctaaaagcagtgcaagaacttcttggtaagactgggaatgtcagcagcttc
tggatggaccaaataaagacccattgctatgttacttactcatctgtggaagaagctatt
gagacacggaatgctgtatataatttgcaatggccaccaaatggtgggcgtctcttagtt
gcagagtatgttgatcctgaagaagtgaaaatgaagttagaacctcctcctactcaggct
gcatcggacagcactgatcgagcagttcctcctgctccccccttctcacagccagagcct
tccccccatctgcacagggagcagcatccagttccagtcattctcccacctccaccacca
ttgtcaaaacccccaccagtagcaagagaacggcttccatctccaccacccctccctgag
aaagttgacccacctattgtcactctggatgatctcttccgcaaaaccacagcaactcct
cggatctactatctacctttgtctgaagagcaagttgccgcaaaactttcaacacagggt
aaaagcgggaggcagtag
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